PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026407578.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

S1Fa-like

Protein Properties

Length: 735aa MW: 79240.4 Da PI: 8.0535

Description

S1Fa-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026407578.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	S1FA	22.4	2.6e-07	310	360	7	56
S1FA 7 eakGlnPGlivllvvgglllvflvgnyilyvyaqkn.lPPrkkkPvskkkl 56 kGl PGli+l+ v+ v l+g i+y+y +++ P sk kl XP_026407578.1 310 PKKGLKPGLIILISVADAAAVALIGLVIIYIYWKRKdSPNGCCSCTSKTKL 360 569*****************************8755044445556667666 PP

Sequence ? help Back to Top
Protein Sequence Length: 735 aa Download sequence
MKIVQLLFFL ILFLQNPNPL SSLSPDGLSL LALKSAMDSS PSSVAVFSDW NENDSNPCHW 60 SGVSCMKVHG FPDPRVVGIT IAGKHLKGYI PSELGSLIFL RRLNLHGNQL HGSIPDQLFN 120 ASSLHSLFLY GNNLTGSLPP SICNLPRLQN LDLSSNALSG GIPSSFSSCR ELQRLVLSRN 180 KFSGEIPVGI WSKLQNLMQL DLSSNSFTGE IPNDLGELKS LTGTLNLSFN EFTGEIPKAL 240 EKLPVAVSFD LRNNNLSGEI PQKGTFSNQG PTAFLNNPSL CGFPLQKSCQ NIENPSSGSS 300 VSGQERGNKP KKGLKPGLII LISVADAAAV ALIGLVIIYI YWKRKDSPNG CCSCTSKTKL 360 GSNNQNQNGT MGCSLFSCSC ANGEAEESDL DSPSEKDSHE HNTSSGDQEE GNLVAIDKGF 420 SFELDELLRA SAYVLGKSGL GIVYKVVLGN GIPVAVRRLG EGGGQRYKEF VAEIQAIGKI 480 KHPNVVKLRA YYWAPDEKLL ICDFISNGNL AFALHGRNGY ASGGGSLSWT TRLKIAKGAA 540 RGLAYLHECS PRKFVHGDVK PTNILLDNDF NAYISDFGLN RLISITGSDQ TSTGGLIGGA 600 LPYMKAVQTE KPNYKAPEAR VIGMRPTQKW DVYSFGLVLL GLLTGKSPES SSSPMASAST 660 SSRGESGVDL VRLVKRGFEV EKPLSEMVDP MLLQQVHAKK EVMAVFHVAL ACTESDPEIR 720 PRMKTVSENL DKIGN

Sequence ? help Back to Top

Protein Sequence Length: 735 aa Download sequence

MKIVQLLFFL ILFLQNPNPL SSLSPDGLSL LALKSAMDSS PSSVAVFSDW NENDSNPCHW  60
SGVSCMKVHG FPDPRVVGIT IAGKHLKGYI PSELGSLIFL RRLNLHGNQL HGSIPDQLFN  120
ASSLHSLFLY GNNLTGSLPP SICNLPRLQN LDLSSNALSG GIPSSFSSCR ELQRLVLSRN  180
KFSGEIPVGI WSKLQNLMQL DLSSNSFTGE IPNDLGELKS LTGTLNLSFN EFTGEIPKAL  240
EKLPVAVSFD LRNNNLSGEI PQKGTFSNQG PTAFLNNPSL CGFPLQKSCQ NIENPSSGSS  300
VSGQERGNKP KKGLKPGLII LISVADAAAV ALIGLVIIYI YWKRKDSPNG CCSCTSKTKL  360
GSNNQNQNGT MGCSLFSCSC ANGEAEESDL DSPSEKDSHE HNTSSGDQEE GNLVAIDKGF  420
SFELDELLRA SAYVLGKSGL GIVYKVVLGN GIPVAVRRLG EGGGQRYKEF VAEIQAIGKI  480
KHPNVVKLRA YYWAPDEKLL ICDFISNGNL AFALHGRNGY ASGGGSLSWT TRLKIAKGAA  540
RGLAYLHECS PRKFVHGDVK PTNILLDNDF NAYISDFGLN RLISITGSDQ TSTGGLIGGA  600
LPYMKAVQTE KPNYKAPEAR VIGMRPTQKW DVYSFGLVLL GLLTGKSPES SSSPMASAST  660
SSRGESGVDL VRLVKRGFEV EKPLSEMVDP MLLQQVHAKK EVMAVFHVAL ACTESDPEIR  720
PRMKTVSENL DKIGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12020.2	2e-09	WRKY family protein