PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026407986.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 503aa MW: 54925.9 Da PI: 6.6344

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026407986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.4	1e-15	60	104	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT++E++++++a +++G W++I ++g ++t+ q++s+ qk+ XP_026407986.1 60 RERWTEDEHKKFLEALRLYGRA-WRRIEDHIG-TKTAVQIRSHAQKF 104 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MANQDKSCGS SSNATAMDDS QNYMEVGSQS GNAMQFKENY SSGEDNLLKA RKPYTITKQR 60 ERWTEDEHKK FLEALRLYGR AWRRIEDHIG TKTAVQIRSH AQKFFSKVVR ESGSNDAGSV 120 KPIEIPPPRP KRKPMHPYPR KMVSSAKKQT LVSEKLERSM SPNFSTSEQE NQSPASVLSV 180 VGSDAMGSSF SNTQSRSQSP VSSVSDVKHV ISSSTKQEIG SPSTSSLAEE ENGSSCGAIK 240 EQSSMKNDFC SKDGEASGEG VTEEAPVVSL KLFGRTVLVT DSRRPSTSLS SGVCKSLVSE 300 FHQENSDTCD GMALETAQSN NMTQPDSFVG PSGSVWRQWP SALCNMQFQG VNSNAMEAAA 360 SAASSLHWWA LYGGLQLPLA LSFSNSLQVA PNSSPEDALR EMKVQYVEEA GTSSATGTVD 420 EVEISEQNAV NSRRRETVAD NDIKEVDLVL GLKPRETSES LAQKSSSERR GFVPYKRCLS 480 ERSRQSSGIA GEDRDGQRMR LCL

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MANQDKSCGS SSNATAMDDS QNYMEVGSQS GNAMQFKENY SSGEDNLLKA RKPYTITKQR  60
ERWTEDEHKK FLEALRLYGR AWRRIEDHIG TKTAVQIRSH AQKFFSKVVR ESGSNDAGSV  120
KPIEIPPPRP KRKPMHPYPR KMVSSAKKQT LVSEKLERSM SPNFSTSEQE NQSPASVLSV  180
VGSDAMGSSF SNTQSRSQSP VSSVSDVKHV ISSSTKQEIG SPSTSSLAEE ENGSSCGAIK  240
EQSSMKNDFC SKDGEASGEG VTEEAPVVSL KLFGRTVLVT DSRRPSTSLS SGVCKSLVSE  300
FHQENSDTCD GMALETAQSN NMTQPDSFVG PSGSVWRQWP SALCNMQFQG VNSNAMEAAA  360
SAASSLHWWA LYGGLQLPLA LSFSNSLQVA PNSSPEDALR EMKVQYVEEA GTSSATGTVD  420
EVEISEQNAV NSRRRETVAD NDIKEVDLVL GLKPRETSES LAQKSSSERR GFVPYKRCLS  480
ERSRQSSGIA GEDRDGQRMR LCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	4e-48	MYB_related family protein