PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026408012.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 215aa MW: 24865.5 Da PI: 9.5916

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026408012.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.5	6.2e-20	33	126	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 ++Y eY+k++GFs+rk++s+ + r +it+ fvC +eg + ++ ++ + k++r++++ + +Cka++++ + +++w+++ ++++HnH ++ XP_026408012.1 33 NYYTEYGKSLGFSIRKRSSYATGRGPRITRVIFVCGCEGIHVSRPDQdeiDLKRKRNTSSMKSDCKAMIRIAFDIkHQTWYINIFREDHNHVMV 126 69***********************************99888877677788999999*********98779************886 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MTNMDEDTEV PSDGKLSKPA MYMYFSSIEE AENYYTEYGK SLGFSIRKRS SYATGRGPRI 60 TRVIFVCGCE GIHVSRPDQD EIDLKRKRNT SSMKSDCKAM IRIAFDIKHQ TWYINIFRED 120 HNHVMVSPKN RHLMRSSKYM PPAAKSLAEK FNKERLPVGK VASLFGESEN IGFTPRDVYN 180 HLRTVRQSLI EVGDAEAVMN YFRKRTIEIP IFTMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-17	FAR1 family protein