PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026408018.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 301aa    MW: 33370.8 Da    PI: 6.3138
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026408018.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding292.5e-09224267344
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 
                       WT eEd  l+ avk+lG ++W+ I +       Rt+ q+  rw
   XP_026408018.1 224 TWTLEEDNELIAAVKKLGERNWANILKADFfkGDRTASQLSQRW 267
                      7************************8742222567777776666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MASSDNKTQK RWKGLIRKED IASDLTRYSA PTKLALLKEV SQFPDVIIDR NVLVKKTTTG  60
IISSREYPML WRHLAYCDKL PEAVDEKLEE QRLDDEDSDL EYELLEAFPP ATDEASSEVA  120
ACVKVLLASG LSDDAEGSPI TVEAPFTINM PTWQDSKSPL DNPQPCSLKG INITVPVSVQ  180
KQSSAAVTTA KGLDGTVATT AKGLDGTMVN AGGVQPAKIR KWKTWTLEED NELIAAVKKL  240
GERNWANILK ADFFKGDRTA SQLSQRWGII RKRLKEQTKR THRAMGCNQP SSYTSSEYAH  300
E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.12e-52MYB_related family protein