PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026408042.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family ARF
Protein Properties Length: 832aa    MW: 92888 Da    PI: 6.1039
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026408042.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.82.1e-23120221199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_026408042.1 120 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 210
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_026408042.1 211 KNQLLLGIRRA 221
                     9999****997 PP
2Auxin_resp116.81.8e-38246329183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k+ ka+  ++vsvGmRf+m fete+ss rr++Gt++g+ dldp rWpnS+Wrs+k
  XP_026408042.1 246 AAHAAATNSRFTIFYNPRASPSEFVIPLSKYAKAVFhTRVSVGMRFRMLFETEESSVRRYMGTITGIVDLDPARWPNSHWRSVK 329
                     79********************************87599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 832 aa     Download sequence    
MKLSSSSGLG QQSHEELWHA CAGPLVSLPT VGSRVVYFPQ GHSEQVAAST NKEVDGHIPN  60
YPNLPPQLIC QLHNVTMHAD VETDEVYAQM TLQPLTQQEQ KDTYLPADLG IPSKQPTNYF  120
CKTLTASDTS THGGFSVPRR AAEKVFPPLD FSQQPPAQEL IARDLHDVEW KFRHIFRGQP  180
KRHLLTTGWS VFVSAKRLVA GDSVLFIWNE KNQLLLGIRR ASRPQTVMPS SVLSSDSMHI  240
GLLAAAAHAA ATNSRFTIFY NPRASPSEFV IPLSKYAKAV FHTRVSVGMR FRMLFETEES  300
SVRRYMGTIT GIVDLDPARW PNSHWRSVKV GWDESTAGER QPRVSLWEIE PLTTFPMYPS  360
LFPLRLKRPW HPGVSSFNDN KDDPTNALMW LRGDTADRSL QSLNFQGLGM APWMQQRLDP  420
SLLGNEHDQR YQTITAAALQ DIRGGDPMKQ QYMQFQQPLQ YLQQSCNPNQ LLQEQQIIQQ  480
SHPQQILHAQ SQTMSDNQSS PILQQPPNGQ HSQNQQSQQH QHNFQQNFQI PNNQFEQQET  540
PMSTFVHKPD FTDSNITFSA PLSPSIQNML GSICPEGSGN LLNFSRTSQS MLNDQQNQQS  600
WAPKFSYSQA NNFGNSGSLP PFPGKDGIVE PDNCSGDMQT QQFFGVNMDS SPLLIPGAVP  660
TLGSTSIDAE VSPMPFDGSG YQRSLFGCVD DSSEFVQSAA PVDPPTRTFV KVYKSGSTVG  720
RSLDIGRFSS YDELREELGQ MFGVEGQLGP LRSGWQLVFV DRENDVLLLG DDPWEAFVNN  780
VWYIKILSPE DVLKLGKHGI ESLSSNGQRL NSNTCDSRNL VSGISSVGSL EY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein