PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026408043.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARF

Protein Properties

Length: 825aa MW: 92216.2 Da PI: 6.0208

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026408043.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.8	2e-23	113	214	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++p++ ae+ +++++ ++l+ +d++ +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F +++ XP_026408043.1 113 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 203 99***************************8544444..48********************************************..889 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 + +l+++++r+ XP_026408043.1 204 KNQLLLGIRRA 214 9999**997 PP
2	Auxin_resp	116.8	1.8e-38	239	322	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+++YnPras+seFv++++k+ ka+ ++vsvGmRf+m fete+ss rr++Gt++g+ dldp rWpnS+Wrs+k XP_026408043.1 239 AAHAAATNSRFTIFYNPRASPSEFVIPLSKYAKAVFhTRVSVGMRFRMLFETEESSVRRYMGTITGIVDLDPARWPNSHWRSVK 322 79******************************87599****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 825 aa Download sequence
MKLSSSSGLG QQSHEELWHA CAGPLVSLPT VGSRVVYFPQ GHSEQEVDGH IPNYPNLPPQ 60 LICQLHNVTM HADVETDEVY AQMTLQPLTQ QEQKDTYLPA DLGIPSKQPT NYFCKTLTAS 120 DTSTHGGFSV PRRAAEKVFP PLDFSQQPPA QELIARDLHD VEWKFRHIFR GQPKRHLLTT 180 GWSVFVSAKR LVAGDSVLFI WNEKNQLLLG IRRASRPQTV MPSSVLSSDS MHIGLLAAAA 240 HAAATNSRFT IFYNPRASPS EFVIPLSKYA KAVFHTRVSV GMRFRMLFET EESSVRRYMG 300 TITGIVDLDP ARWPNSHWRS VKVGWDESTA GERQPRVSLW EIEPLTTFPM YPSLFPLRLK 360 RPWHPGVSSF NDNKDDPTNA LMWLRGDTAD RSLQSLNFQG LGMAPWMQQR LDPSLLGNEH 420 DQRYQTITAA ALQDIRGGDP MKQQYMQFQQ PLQYLQQSCN PNQLLQEQQI IQQSHPQQIL 480 HAQSQTMSDN QSSPILQQPP NGQHSQNQQS QQHQHNFQQN FQIPNNQFEQ QETPMSTFVH 540 KPDFTDSNIT FSAPLSPSIQ NMLGSICPEG SGNLLNFSRT SQSMLNDQQN QQSWAPKFSY 600 SQANNFGNSG SLPPFPGKDG IVEPDNCSGD MQTQQFFGVN MDSSPLLIPG AVPTLGSTSI 660 DAEVSPMPFD GSGYQRSLFG CVDDSSEFVQ SAAPVDPPTR TFVKVYKSGS TVGRSLDIGR 720 FSSYDELREE LGQMFGVEGQ LGPLRSGWQL VFVDRENDVL LLGDDPWEAF VNNVWYIKIL 780 SPEDVLKLGK HGIESLSSNG QRLNSNTCDS RNLVSGISSV GSLEY

Sequence ? help Back to Top

Protein Sequence Length: 825 aa Download sequence

MKLSSSSGLG QQSHEELWHA CAGPLVSLPT VGSRVVYFPQ GHSEQEVDGH IPNYPNLPPQ  60
LICQLHNVTM HADVETDEVY AQMTLQPLTQ QEQKDTYLPA DLGIPSKQPT NYFCKTLTAS  120
DTSTHGGFSV PRRAAEKVFP PLDFSQQPPA QELIARDLHD VEWKFRHIFR GQPKRHLLTT  180
GWSVFVSAKR LVAGDSVLFI WNEKNQLLLG IRRASRPQTV MPSSVLSSDS MHIGLLAAAA  240
HAAATNSRFT IFYNPRASPS EFVIPLSKYA KAVFHTRVSV GMRFRMLFET EESSVRRYMG  300
TITGIVDLDP ARWPNSHWRS VKVGWDESTA GERQPRVSLW EIEPLTTFPM YPSLFPLRLK  360
RPWHPGVSSF NDNKDDPTNA LMWLRGDTAD RSLQSLNFQG LGMAPWMQQR LDPSLLGNEH  420
DQRYQTITAA ALQDIRGGDP MKQQYMQFQQ PLQYLQQSCN PNQLLQEQQI IQQSHPQQIL  480
HAQSQTMSDN QSSPILQQPP NGQHSQNQQS QQHQHNFQQN FQIPNNQFEQ QETPMSTFVH  540
KPDFTDSNIT FSAPLSPSIQ NMLGSICPEG SGNLLNFSRT SQSMLNDQQN QQSWAPKFSY  600
SQANNFGNSG SLPPFPGKDG IVEPDNCSGD MQTQQFFGVN MDSSPLLIPG AVPTLGSTSI  660
DAEVSPMPFD GSGYQRSLFG CVDDSSEFVQ SAAPVDPPTR TFVKVYKSGS TVGRSLDIGR  720
FSSYDELREE LGQMFGVEGQ LGPLRSGWQL VFVDRENDVL LLGDDPWEAF VNNVWYIKIL  780
SPEDVLKLGK HGIESLSSNG QRLNSNTCDS RNLVSGISSV GSLEY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37020.1	0.0	ARF family protein