PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026408203.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 559aa MW: 63603.8 Da PI: 4.9524

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026408203.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	76.1	4.6e-24	194	247	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+++ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYR+ XP_026408203.1 194 KARVVWSVDLHQKFVKAVNHI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRM 247 68*****************.9*****************************8 PP
2	Myb_DNA-binding	36	1.6e-11	196	246	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+ G + +k+I m+ +t++++ s++qky+ XP_026408203.1 196 RVVWSVDLHQKFVKAVNHIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 246 678***********************************************7 PP
3	Response_reg	78.4	2.4e-26	10	117	1	108
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l k +y ev+++ ++eal+ l+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_026408203.1 10 VLVVDDDPTWLKILEKMLIKCNY-EVTTCCLAREALDVLRERKggFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 102 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHH CS Response_reg 94 akdflsKpfdpeelv 108 a d+l Kp+ ++el+ XP_026408203.1 103 ACDYLLKPVRMKELR 117 ********99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MEKFPSGLRV LVVDDDPTWL KILEKMLIKC NYEVTTCCLA REALDVLRER KGGFDIVISD 60 VNMPDMDGFK LLEHVGLEMD LPVIMMSVDG ETSRVMKGVQ HGACDYLLKP VRMKELRIIW 120 QHVFRKKMQE VKEIESQEGI EDALKMRNGL YEFDAISHLL SGDNSGSSSA KKRKDMENHD 180 LDENDFNDLS SSKKARVVWS VDLHQKFVKA VNHIGFDKVG PKKILDLMNV PWLTRENVAS 240 HLQKYRMYLS RLQKHNDPKN SFGSIKQPDI TSKDHPPTSF SFQSSSTMQQ RSTSPSCSFG 300 YSADNVLIQD VSSTNMYEDV NGIGSSFMSA IKPKEASSDD FIAAPKASHK SFASITPQQI 360 SWGRETQQTL FMEEPKEEHK PYPYIDQPQP SLEHQMIQHQ SLPFAISGTL VTAERGRSLA 420 RDIVSPYTRC TTDLFSAQSD TDCTVNTQAF GEMFSRLPSI KNQNLEQDLL LDLEPEQQYF 480 IKRSGSTSVS SEEDQQLVSV QDYGYFENVE PNNRCVLEDY SEPITELSSS QLYDGQKLNS 540 AYLYEIMEYP NVDQLLFIT

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MEKFPSGLRV LVVDDDPTWL KILEKMLIKC NYEVTTCCLA REALDVLRER KGGFDIVISD  60
VNMPDMDGFK LLEHVGLEMD LPVIMMSVDG ETSRVMKGVQ HGACDYLLKP VRMKELRIIW  120
QHVFRKKMQE VKEIESQEGI EDALKMRNGL YEFDAISHLL SGDNSGSSSA KKRKDMENHD  180
LDENDFNDLS SSKKARVVWS VDLHQKFVKA VNHIGFDKVG PKKILDLMNV PWLTRENVAS  240
HLQKYRMYLS RLQKHNDPKN SFGSIKQPDI TSKDHPPTSF SFQSSSTMQQ RSTSPSCSFG  300
YSADNVLIQD VSSTNMYEDV NGIGSSFMSA IKPKEASSDD FIAAPKASHK SFASITPQQI  360
SWGRETQQTL FMEEPKEEHK PYPYIDQPQP SLEHQMIQHQ SLPFAISGTL VTAERGRSLA  420
RDIVSPYTRC TTDLFSAQSD TDCTVNTQAF GEMFSRLPSI KNQNLEQDLL LDLEPEQQYF  480
IKRSGSTSVS SEEDQQLVSV QDYGYFENVE PNNRCVLEDY SEPITELSSS QLYDGQKLNS  540
AYLYEIMEYP NVDQLLFIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-118	ARR-B family protein