PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026408240.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 455aa MW: 50400.4 Da PI: 5.878

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026408240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.5	4.5e-17	261	356	2	94
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 +k+l + dv+++gr+v+pkk ae++ ++ + ++ l++ed + +W++k++y ++ks++yv++ ++ +Fvk ++L++gD ++ ++++ ++++ XP_026408240.1 261 QKELRNTDVGNLGRIVIPKKDAEANlpPLEAKDGIILQMEDmNYSVEWKFKYRYwpNNKSRMYVME-NTGDFVKMHNLQAGDLLIVYREE-NSGK 353 68999********************777778999*8888*****888888889988.******************766.4554 PP .EE CS B3 92 lvv 94 + v XP_026408240.1 354 FIV 356 455 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MGSVPPGGDA ATDSFSRNFM QNNGVLQSQL GTIGGRAELA PIPPKVEISW GQRTVENPCA 60 YQYIPYNDIS VSGNATPNLK RKAEVSTNSC DPAQMESLFG QFPSGPSKDS GSNYQVLQSG 120 FDPVQALPQN PYFPITARSQ PVNYSPIPPV NLEPTEKQEM DFFAKSWSQW SENSVGGSDA 180 SLPVNNRKVV RPRFSSSMSM AVISDENRNA NSKPSAKNGY PLFPEHNALE AFPVFDHPSS 240 SSHRPEAEEE TARKGFVLLV QKELRNTDVG NLGRIVIPKK DAEANLPPLE AKDGIILQME 300 DMNYSVEWKF KYRYWPNNKS RMYVMENTGD FVKMHNLQAG DLLIVYREEN SGKFIVRGKK 360 GTRPVYAGDT VELRSTAEMR NHGRVVEERE LATAHGQLNA EQRYAPAGDF FFDLNAGQDM 420 IAPAIPFEFH ANTGGLPKSH FLPGPLLNLH QDDVS

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MGSVPPGGDA ATDSFSRNFM QNNGVLQSQL GTIGGRAELA PIPPKVEISW GQRTVENPCA  60
YQYIPYNDIS VSGNATPNLK RKAEVSTNSC DPAQMESLFG QFPSGPSKDS GSNYQVLQSG  120
FDPVQALPQN PYFPITARSQ PVNYSPIPPV NLEPTEKQEM DFFAKSWSQW SENSVGGSDA  180
SLPVNNRKVV RPRFSSSMSM AVISDENRNA NSKPSAKNGY PLFPEHNALE AFPVFDHPSS  240
SSHRPEAEEE TARKGFVLLV QKELRNTDVG NLGRIVIPKK DAEANLPPLE AKDGIILQME  300
DMNYSVEWKF KYRYWPNNKS RMYVMENTGD FVKMHNLQAG DLLIVYREEN SGKFIVRGKK  360
GTRPVYAGDT VELRSTAEMR NHGRVVEERE LATAHGQLNA EQRYAPAGDF FFDLNAGQDM  420
IAPAIPFEFH ANTGGLPKSH FLPGPLLNLH QDDVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	3e-39	B3 family protein