PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026408322.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HB-other

Protein Properties

Length: 1248aa MW: 140241 Da PI: 9.1179

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026408322.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	33.6	6.6e-11	22	73	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + t+ qle Le+++ +++ p++e+ e+ A l+Lt +qV+ WF +R ++kk XP_026408322.1 22 RKTPFQLESLENFYSEEPFPTQETLEDYAFVLNLTYKQVRGWFAEKRRRDKK 73 56999*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1248 aa Download sequence
MGNDDMVTTS EQDYGINNHN RRKTPFQLES LENFYSEEPF PTQETLEDYA FVLNLTYKQV 60 RGWFAEKRRR DKKGREGVEL PSKKSTKGSC IKTGRCPAKK RNLRDCVSKK PNAHLSTKTS 120 RSKMFKNDAG KSKYSNIRNH GEESLIDFFG KKNKSNQKKR KLSYIQDILP PDYLLEKVFR 180 KDGPPLGVEF DSLPLGAFSH SAVTDACSFR STCADNQRAP KRRKVSKSLI LQPEACKNKS 240 VLVKHGIGKG LVLRHGIGKG LMLRHDMGEA LMMRHGMGKG LLMKHGIGKG LMMRHGMGKG 300 LMTARHAVNP NNIDIFSTDG RITARKGNNL KLLKSQEATL QKTRKSVHQK LAEKQKNLRN 360 KVQERRKRVV RKPKMQSRKN GNSNKSHQEE CKLCSGESRD EDTSSAFATS LDDEELELRE 420 LQEGPNPPMC SAKLASNGIH SCSLCKDLLP RFPPIAVKMN LPFQMQPWVS STELVKKLFK 480 AIRFLYTHAV TVDMSPFTLD EFAQAFHDKD SLLLGEMHVA LLKRLLSDVE VQLSSGLYSH 540 ASKDSRFLAF LHYAKDQELR VKFWNRSLNP LTWTEILRQV MIGAGFGSKH SVLRKKQLEK 600 EGNVMIKYGL FPGTMKSELF SILSEQGNNG LKVPELANLL QISDLNLAET IDELEVQIYS 660 TLSRDISLFE KISPSAYRVR NNPPSTELAG ESDSEDSKSG DADDSGDSIT SNSSDDDSEI 720 DSGTSSLSIV KYKRHRKRKN STVVANTEID ESHPGELWVL GLMEGEYSDL SIEEKLDALV 780 ALVDLANAGS SQRVEDPSRI TTERVPIVNH QGGGKIKRSS TAQLNVGNSF QGCISVDPLT 840 TMMEYPSRKG KGLCRKDGRY TSEAIRVDAM ELNGHPLLSV YLGSDRRYNC YWLFLGPCNV 900 KDPGHRRIYF ESSEDGHWEV IDTEEALCAL LSILDSRGTR EARLVASLEK REALLSQSMS 960 AAKMADKDIN GQRQSDLSSP DTHSGEGSSP ISDIDNSQIL GEALNDSRSS SHSVISHYVK 1020 KKEDQKQKWD RLQAFDAWIW NSFYTNLNAV KYSKRSYLDS LAHCDSCHDL YWRDEKHCQV 1080 CHITFELDFD LEERYAIHAA TCTEKESHIF PKHKVLSSQL QSLKAAIHAI EAVMPPGALV 1140 SSWTVSTHQL WVNRLRRTSS TAELFQVLSD FTGAIDENWL CQCSGDLGSK LVLDEIVVLF 1200 PTMPQTTSAI ALWLAKLDTL LAPYLEKVNS GKAQAKQNTR QTRRSALR

Sequence ? help Back to Top

Protein Sequence Length: 1248 aa Download sequence

MGNDDMVTTS EQDYGINNHN RRKTPFQLES LENFYSEEPF PTQETLEDYA FVLNLTYKQV  60
RGWFAEKRRR DKKGREGVEL PSKKSTKGSC IKTGRCPAKK RNLRDCVSKK PNAHLSTKTS  120
RSKMFKNDAG KSKYSNIRNH GEESLIDFFG KKNKSNQKKR KLSYIQDILP PDYLLEKVFR  180
KDGPPLGVEF DSLPLGAFSH SAVTDACSFR STCADNQRAP KRRKVSKSLI LQPEACKNKS  240
VLVKHGIGKG LVLRHGIGKG LMLRHDMGEA LMMRHGMGKG LLMKHGIGKG LMMRHGMGKG  300
LMTARHAVNP NNIDIFSTDG RITARKGNNL KLLKSQEATL QKTRKSVHQK LAEKQKNLRN  360
KVQERRKRVV RKPKMQSRKN GNSNKSHQEE CKLCSGESRD EDTSSAFATS LDDEELELRE  420
LQEGPNPPMC SAKLASNGIH SCSLCKDLLP RFPPIAVKMN LPFQMQPWVS STELVKKLFK  480
AIRFLYTHAV TVDMSPFTLD EFAQAFHDKD SLLLGEMHVA LLKRLLSDVE VQLSSGLYSH  540
ASKDSRFLAF LHYAKDQELR VKFWNRSLNP LTWTEILRQV MIGAGFGSKH SVLRKKQLEK  600
EGNVMIKYGL FPGTMKSELF SILSEQGNNG LKVPELANLL QISDLNLAET IDELEVQIYS  660
TLSRDISLFE KISPSAYRVR NNPPSTELAG ESDSEDSKSG DADDSGDSIT SNSSDDDSEI  720
DSGTSSLSIV KYKRHRKRKN STVVANTEID ESHPGELWVL GLMEGEYSDL SIEEKLDALV  780
ALVDLANAGS SQRVEDPSRI TTERVPIVNH QGGGKIKRSS TAQLNVGNSF QGCISVDPLT  840
TMMEYPSRKG KGLCRKDGRY TSEAIRVDAM ELNGHPLLSV YLGSDRRYNC YWLFLGPCNV  900
KDPGHRRIYF ESSEDGHWEV IDTEEALCAL LSILDSRGTR EARLVASLEK REALLSQSMS  960
AAKMADKDIN GQRQSDLSSP DTHSGEGSSP ISDIDNSQIL GEALNDSRSS SHSVISHYVK  1020
KKEDQKQKWD RLQAFDAWIW NSFYTNLNAV KYSKRSYLDS LAHCDSCHDL YWRDEKHCQV  1080
CHITFELDFD LEERYAIHAA TCTEKESHIF PKHKVLSSQL QSLKAAIHAI EAVMPPGALV  1140
SSWTVSTHQL WVNRLRRTSS TAELFQVLSD FTGAIDENWL CQCSGDLGSK LVLDEIVVLF  1200
PTMPQTTSAI ALWLAKLDTL LAPYLEKVNS GKAQAKQNTR QTRRSALR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	67	87	KRRRDKKGREGVELPSKKSTK
2	218	223	RAPKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-156	HB-other family protein