PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026408968.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 168aa    MW: 19193.7 Da    PI: 8.4288
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026408968.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.32.1e-1737140290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 
                     fY+eY+++ GFs+rk++s+ s + g i +  fv  +eg   ++ +                +k ++++++ rt+Ck ++ + ++  ++ w+ + +
  XP_026408968.1  37 FYKEYGRSKGFSTRKRSSYASANRGGISRVIFVFGCEGVYGKDPNYddsnsfdddeveqeVVKMKKNTSTMRTDCKVMMYIAMDIkRKIWYTNAF 131
                     9**********************999****99988888877776667789******99988888999999************99889******** PP

            FAR1  82 eleHnHela 90 
                     + eHnH ++
  XP_026408968.1 132 VDEHNHVMV 140
                     ******886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
METTTENNET GCNDMSSKDP KPGVGLEFSS IETADLFYKE YGRSKGFSTR KRSSYASANR  60
GGISRVIFVF GCEGVYGKDP NYDDSNSFDD DEVEQEVVKM KKNTSTMRTD CKVMMYIAMD  120
IKRKIWYTNA FVDEHNHVMV SPKKRVLMRS NKYMSSEAKS LVEAFNKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-13FAR1 family protein