PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026409053.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 319aa    MW: 35603.7 Da    PI: 7.2535
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026409053.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.71.3e-1364108147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT++E++++ +a +++  + Wk+I + +g ++t  q++s+ qky
   XP_026409053.1  64 RESWTEQEHDKFFEALQLFDRD-WKKIEAFVG-TKTVIQIRSHAQKY 108
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MVPINQSLNF DDQNHHQPQF EMSGLPAELG GGGGGGSIST ATAAESYEDS LRKIRKPYTI  60
TKSRESWTEQ EHDKFFEALQ LFDRDWKKIE AFVGTKTVIQ IRSHAQKYFQ KVQKNGTSEH  120
LPPPRPKRKA VHPYPQKAAK NVPMLPQTTG VCQTSSNLLE SRSVVRPDPS SLLKTGPAVS  180
SWPQLSNDDT ESARPIASNN CYSSSNNTPS SYPTRETTGQ ANHGPPLRAI PDFAQVYSFI  240
GSVFDPNTSN HLEKLKEMNP IDVDTVLLLM RNLSMNLSSP DFEDQRRLLS SYDVDSCKAP  300
QENEVPFMNP DESKNPRGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.13e-94MYB_related family protein