PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026409307.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 792aa    MW: 85859.8 Da    PI: 5.5406
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026409307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.11.9e-2062117156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe+lF+++++p++++r eL+++l L+ rqVk+WFqNrR+++k
  XP_026409307.1  62 KKRYHRHTPQQIQELEALFKECPHPDEKQRNELSRRLVLEARQVKFWFQNRRTQMK 117
                     688999***********************************************999 PP
2START191.83.2e-602805032206
                     HHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     la +a++elv++a+ +ep+W  ss     e  n+de+++ f++  +     + +ea r++gvv+ +++ lve+l+d k ++  +++    ++ t+
  XP_026409307.1 280 LAMAAMEELVRMAQTNEPLWIPSSfeggkETFNRDEYTRMFAPCIGskpngFVTEATRETGVVIVNSVALVETLMDAK-RYVDMFPcviaRCNTT 373
                     57799**********************99999*********9988899999***************************.99999999999***** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     +vissg      galqlm ae+q+lsplvp R++ f+R+++q+ +g+w++vd+Svd +q+++ + s   +++lpSg++i++++ng++kvtwveh+
  XP_026409307.1 374 DVISSGvggtrnGALQLMHAEFQVLSPLVPiREVNFLRFCKQHAEGVWAVVDISVDANQENS-DTSTYLSRRLPSGCVIQDMPNGYCKVTWVEHA 467
                     **************************************************************.66666679************************ PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++++++h ++++lv+ gl +ga +wvatlqrqce+
  XP_026409307.1 468 EYDENSIHRIYQPLVNAGLGFGAHKWVATLQRQCEC 503
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 792 aa     Download sequence    
MDGHGGGGDR FGENLDGGSG LLGGGARLLG GRELDEYESR SGSDNMDGAN SDDQDTDKPP  60
RKKRYHRHTP QQIQELEALF KECPHPDEKQ RNELSRRLVL EARQVKFWFQ NRRTQMKTQI  120
ERHENSILRQ ENDKLRAENM NVREAMRNPM CNNCGGAAVL GDVSLEEQHL RVENARLKEE  180
LDRVCALAGK FLGRPVSSIG DPLPPSMQIS AGLDLAVGIN GGFGGMSGVN PNLLMGNNNN  240
QFRGSGGSGG MPAMSMVPHQ QQSISSGVDR SVENSMYLDL AMAAMEELVR MAQTNEPLWI  300
PSSFEGGKET FNRDEYTRMF APCIGSKPNG FVTEATRETG VVIVNSVALV ETLMDAKRYV  360
DMFPCVIARC NTTDVISSGV GGTRNGALQL MHAEFQVLSP LVPIREVNFL RFCKQHAEGV  420
WAVVDISVDA NQENSDTSTY LSRRLPSGCV IQDMPNGYCK VTWVEHAEYD ENSIHRIYQP  480
LVNAGLGFGA HKWVATLQRQ CECIAILMSN MPIRDHTGIT QSGRKSMLKL AQRMTQNFCA  540
GVCPSSVHKW NRLSAGNVDA DVRVMTRKSI DDPGEPPGVV LSAATSVWLP ISPQKLFDFL  600
RDERLRSEWD ILSNGGPMQQ MSHINKGQDP GNCVSLLRAG AMNASQSSML ILQETCIDAS  660
GSLVVYAPVD IPAMHVVMSG GDSAYVALLP SGFSIVPDGG PNRQSISNCA DPPNSNNNDG  720
SNGGEDGGGS SSQQLTSDAA GPGASGSLLT VAFQILVNSL PTAKLTVESV ETVNNLISCT  780
VQKIKAALNC EN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein