PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026409382.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 359aa MW: 40866.3 Da PI: 8.2013

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026409382.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.7	4.7e-17	64	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W ++Ede+lv+++++ G g+W+t ++ g++R++k+c++rw +yl XP_026409382.1 64 KGPWNPDEDEILVNYINKNGHGSWRTLPQLAGLNRCGKSCRLRWSNYL 111 79********************************************97 PP
2	Myb_DNA-binding	50.3	5.4e-16	117	161	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eE++l+++++ lG++ W++Ia+ + gRt++++k++++++ XP_026409382.1 117 RGPFTPEEEKLIIQLHGILGNR-WAAIAAQLE-GRTDNEIKNYFNTH 161 89******************.*****.*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MILNFSFQCL RYRNQYPPFT VYSFFSVYLF ISSRTSVGVS VKRVFELRRR MGRQPCCDKH 60 GVKKGPWNPD EDEILVNYIN KNGHGSWRTL PQLAGLNRCG KSCRLRWSNY LRPDIKRGPF 120 TPEEEKLIIQ LHGILGNRWA AIAAQLEGRT DNEIKNYFNT HVKKCLRIMA IDPLTQAPSS 180 SAPFPITTTS SCPSMGHMTQ WESARLEAEA RLSKGSFLRN NSQSTLSTQV KPEHDQFLRL 240 WNSEVGEAFR KLTTTCQSPF SQTSSSTKQA IPPAKIKAEE KTINEQQEEM ECRDYKSDVE 300 DIVVGSESSS SINVSSDMSL QLLLDFPGCE EEMTFFQGQL ATYSVYHNIL TENPLNCSL

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MILNFSFQCL RYRNQYPPFT VYSFFSVYLF ISSRTSVGVS VKRVFELRRR MGRQPCCDKH  60
GVKKGPWNPD EDEILVNYIN KNGHGSWRTL PQLAGLNRCG KSCRLRWSNY LRPDIKRGPF  120
TPEEEKLIIQ LHGILGNRWA AIAAQLEGRT DNEIKNYFNT HVKKCLRIMA IDPLTQAPSS  180
SAPFPITTTS SCPSMGHMTQ WESARLEAEA RLSKGSFLRN NSQSTLSTQV KPEHDQFLRL  240
WNSEVGEAFR KLTTTCQSPF SQTSSSTKQA IPPAKIKAEE KTINEQQEEM ECRDYKSDVE  300
DIVVGSESSS SINVSSDMSL QLLLDFPGCE EEMTFFQGQL ATYSVYHNIL TENPLNCSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-103	MYB family protein