PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026409646.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 161aa MW: 18887.6 Da PI: 9.4985

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026409646.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.2	1.4e-16	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd+ll ++++++G g W+ ++ + g++R++k+c++rw++yl XP_026409646.1 17 KGTWSKEEDQLLRRCIEKFGEGKWSQVPLKAGLNRCGKSCRLRWLDYL 64 799******************************************997 PP
2	Myb_DNA-binding	46.4	8.8e-15	70	115	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l+++ +k+lG++ W++Ia +++ gRt++++k++++++l XP_026409646.1 70 RGDFEPDELDLIIRMHKLLGNR-WSLIAGRLP-GRTANDIKNYYNTHL 115 78999***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
MGSSSSIVFS EMRGLRKGTW SKEEDQLLRR CIEKFGEGKW SQVPLKAGLN RCGKSCRLRW 60 LDYLQPNIKR GDFEPDELDL IIRMHKLLGN RWSLIAGRLP GRTANDIKNY YNTHLKKNSF 120 FKYDTDQEEQ VVVIEKLDNN INDHCPRFKN VNADFFWTSI T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	4e-58	MYB family protein