PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026409755.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 75aa    MW: 8539.28 Da    PI: 6.5131
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026409755.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.73.5e-102667245
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     + + ++E+ l+++ + + G + W++Ia +++ gRt++++  +w 
   XP_026409755.1 26 QDFMEDEEILIAKMHSLVGDR-WSLIAGRIP-GRTAEEIEKYWT 67
                     667799*************99.*********.***********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    
MSDTNHSRSS QDSKDATSST SQNSKQDFME DEEILIAKMH SLVGDRWSLI AGRIPGRTAE  60
EIEKYWTSRH SSSHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.16e-19MYB_related family protein