PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026410059.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 484aa MW: 53178.9 Da PI: 5.2554

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026410059.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.7	2.2e-17	30	77	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l+++v+++G g+W+++ + g+ R++k+c++rw ++l XP_026410059.1 30 KGPWTATEDSILIEYVNKHGEGNWNAVQKNSGLSRCGKSCRLRWANHL 77 79******************************************9986 PP
2	Myb_DNA-binding	48.9	1.6e-15	83	126	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T++E+ l+++++ +lG++ W++ a+ ++ gRt++++k++w++ XP_026410059.1 83 KGSFTPDEERLILELHSKLGNK-WARMAAQLP-GRTDNEIKNYWNT 126 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MMTNNKHSNS TALSDDASSG GGSGGVALKK GPWTATEDSI LIEYVNKHGE GNWNAVQKNS 60 GLSRCGKSCR LRWANHLRPN LKKGSFTPDE ERLILELHSK LGNKWARMAA QLPGRTDNEI 120 KNYWNTRVKR RQRAGLPLHP NDIHKQGTAT FHHSQSYLSQ PPHNLSNFSS SQQQKQNFGT 180 PLSVFEPMNL SSATSYPAQQ NTHFISTPVN GFKHFRGDNY GFSHSYSNNS TSLFNQNLSS 240 QLLPPPSIQF NLGNYDLNQQ QTIMQNQYDS TRTSAPDFST KLELPSNQLS QPASDAEYQI 300 NDSLSIRSNS GLLDALIQEA QAMGNGEDMK REGLSSEQED KCRNHDDALV GDAPSSNGTP 360 PLGSVGGQDW NDSSPNHSSV GEKRKQPTDI ELNSAVEEDD DLSNLLDIIP SAMLVSDFYN 420 DGGEISNGQS SGVTDEDTGL DMQQLPSSIN TTTTNTTNTT TTNTTMSMSH DWTTGDWNNL 480 PEMC

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MMTNNKHSNS TALSDDASSG GGSGGVALKK GPWTATEDSI LIEYVNKHGE GNWNAVQKNS  60
GLSRCGKSCR LRWANHLRPN LKKGSFTPDE ERLILELHSK LGNKWARMAA QLPGRTDNEI  120
KNYWNTRVKR RQRAGLPLHP NDIHKQGTAT FHHSQSYLSQ PPHNLSNFSS SQQQKQNFGT  180
PLSVFEPMNL SSATSYPAQQ NTHFISTPVN GFKHFRGDNY GFSHSYSNNS TSLFNQNLSS  240
QLLPPPSIQF NLGNYDLNQQ QTIMQNQYDS TRTSAPDFST KLELPSNQLS QPASDAEYQI  300
NDSLSIRSNS GLLDALIQEA QAMGNGEDMK REGLSSEQED KCRNHDDALV GDAPSSNGTP  360
PLGSVGGQDW NDSSPNHSSV GEKRKQPTDI ELNSAVEEDD DLSNLLDIIP SAMLVSDFYN  420
DGGEISNGQS SGVTDEDTGL DMQQLPSSIN TTTTNTTNTT TTNTTMSMSH DWTTGDWNNL  480
PEMC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	9e-73	MYB family protein