PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026410527.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 978aa MW: 108159 Da PI: 7.4228

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026410527.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.4	6.2e-19	405	504	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d++gr+W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_026410527.1 405 FEKMLSASDAGRIGRLVLPKKCAEAYfpTISNPEGLPLKVQDLQGREWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDIVTFSRID-PEGK 497 89************************444556667***********99899999999.*******************987.6666 PP .EEEEE- CS B3 92 lvvkvfr 98 lv++ ++ XP_026410527.1 498 LVMGCRK 504 6666554 PP

Sequence ? help Back to Top
Protein Sequence Length: 978 aa Download sequence
MMSTNSSSSS TKICFNPDCK DTKSERYRKG WRLRTSVYSE LCDRCASAYE EGRFCDIFHS 60 NAAGWRNCES CGKRVHCGCI VSTHAFVLLD AGGVDCMGCA RKNIMMASNQ LWPSSSMPER 120 LKDLSVKNWN SGAGPSSVSG PSPVAGRWLS TPWSAAGAQS EVHPRGDNSS STSLENKKHE 180 DPSEKAPSTS LNLAVVDRFS NGTASLDTIK EFNHFHREEG YVDRQQVLRN LNGTRDPTDA 240 RNGVIAEPGL KSSASGITVE TFAADARNRV ISEPGYRRSA SINITFETLT QSFGNVSVQS 300 CPAKDDRSTP YIGLTLPYSH HETNVPNRIS SYQPHLQHPP PLGKPFYPNQ LGGIDLSAEA 360 QIRNGRPRGD VRSRNQSLPR YSPRITDQEL RQISGDSNSV ITPLFEKMLS ASDAGRIGRL 420 VLPKKCAEAY FPTISNPEGL PLKVQDLQGR EWVFQFRFWP NNNSRMYVLE GVTPCIQSMQ 480 LQAGDIVTFS RIDPEGKLVM GCRKASNGPG CDQDNQSSKA GDGIFKSPEG NIRNSKPCEV 540 VSTPLMGGME STSYSSINQF NSEDPTIDWS KVDKSSYIAK DVQCSKPSVL PSKRKSSTLG 600 SRSKRLRIET EDQIELKLTW EEAQGLLRPR RDHAPSVVVI EGHSFEEYEE APIIGRPTIF 660 ITNNVGERNQ WAQCERCSKW RKLPEHALLP SRWICSDNLW DPERSSCSSA QELTLEQLED 720 ILSSTSDDGS KNAKAKNKDS DPVEASEGLG ALANVVTQEN HEAFASTQQT TTRHPRHKPG 780 CTCIVCSQPP SGKGPKHKDT CTCNVCDTVR RRFRTLMERR EKRQLEKEAE TARKKQDENI 840 ENEDDRLISS SKKNKTYASS RKMIKESDEN GIRNKLSSSP FKGGIDLNIQ PEREDEHSTV 900 PDLGDTARTM SHEQPQMLAS SDGYIELVVN KKEGVGNDAG GAVKLENDGS YGNGRYNLDT 960 DQDHPVPTLV PVSTSTTG

Sequence ? help Back to Top

Protein Sequence Length: 978 aa Download sequence

MMSTNSSSSS TKICFNPDCK DTKSERYRKG WRLRTSVYSE LCDRCASAYE EGRFCDIFHS  60
NAAGWRNCES CGKRVHCGCI VSTHAFVLLD AGGVDCMGCA RKNIMMASNQ LWPSSSMPER  120
LKDLSVKNWN SGAGPSSVSG PSPVAGRWLS TPWSAAGAQS EVHPRGDNSS STSLENKKHE  180
DPSEKAPSTS LNLAVVDRFS NGTASLDTIK EFNHFHREEG YVDRQQVLRN LNGTRDPTDA  240
RNGVIAEPGL KSSASGITVE TFAADARNRV ISEPGYRRSA SINITFETLT QSFGNVSVQS  300
CPAKDDRSTP YIGLTLPYSH HETNVPNRIS SYQPHLQHPP PLGKPFYPNQ LGGIDLSAEA  360
QIRNGRPRGD VRSRNQSLPR YSPRITDQEL RQISGDSNSV ITPLFEKMLS ASDAGRIGRL  420
VLPKKCAEAY FPTISNPEGL PLKVQDLQGR EWVFQFRFWP NNNSRMYVLE GVTPCIQSMQ  480
LQAGDIVTFS RIDPEGKLVM GCRKASNGPG CDQDNQSSKA GDGIFKSPEG NIRNSKPCEV  540
VSTPLMGGME STSYSSINQF NSEDPTIDWS KVDKSSYIAK DVQCSKPSVL PSKRKSSTLG  600
SRSKRLRIET EDQIELKLTW EEAQGLLRPR RDHAPSVVVI EGHSFEEYEE APIIGRPTIF  660
ITNNVGERNQ WAQCERCSKW RKLPEHALLP SRWICSDNLW DPERSSCSSA QELTLEQLED  720
ILSSTSDDGS KNAKAKNKDS DPVEASEGLG ALANVVTQEN HEAFASTQQT TTRHPRHKPG  780
CTCIVCSQPP SGKGPKHKDT CTCNVCDTVR RRFRTLMERR EKRQLEKEAE TARKKQDENI  840
ENEDDRLISS SKKNKTYASS RKMIKESDEN GIRNKLSSSP FKGGIDLNIQ PEREDEHSTV  900
PDLGDTARTM SHEQPQMLAS SDGYIELVVN KKEGVGNDAG GAVKLENDGS YGNGRYNLDT  960
DQDHPVPTLV PVSTSTTG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	819	855	RREKRQLEKEAETARKKQDENIENEDDRLISSSKKNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-147	B3 family protein