PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026410729.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 212aa MW: 24297.7 Da PI: 8.2701

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026410729.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.2	6.3e-19	43	143	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...........tekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 fY+e +++ s+rk++s+ + ++g i + fvCs+eg +++++ ++++++++++ rt+Cka++++ +++ +++w+v+++++e XP_026410729.1 43 FYKECGRSKKISTRKRSSYATAQKGGISRVIFVCSCEGICDRDSNYddfdgevepeaEKRRKQNTSTMRTNCKAMMHIVLDTkRKTWYVNTFVHE 137 9999999999***************************999988899***9777777888899********9989******* PP FAR1 85 HnHela 90 HnHe++ XP_026410729.1 138 HNHEMV 143 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MHTIAENDDV ECDGMPYCNE MPLENGKPYV GLAFSYIEDA DLFYKECGRS KKISTRKRSS 60 YATAQKGGIS RVIFVCSCEG ICDRDSNYDD FDGEVEPEAE KRRKQNTSTM RTNCKAMMHI 120 VLDTKRKTWY VNTFVHEHNH EMVSPKKRAL MRSNKYMPLE AKSMAEAFNK NKLPVGKVVL 180 LFGQIENATF TPRDVYNHLR TVRKSLLDVG DA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	101	127	KRRKQNTSTMRTNCKAMMHIVLDTKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-12	FAR1 family protein