PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026411253.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 317aa    MW: 36804.9 Da    PI: 6.285
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026411253.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.82.5e-131461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd +l + +   G ++W+t+++  g+ R++k+c++rw +yl
   XP_026411253.1 14 RGPWTIEEDHKLMHFILNNGIHCWRTVPKLAGLMRCGKSCRLRWINYL 61
                     89********************************************97 PP
2Myb_DNA-binding55.11.8e-1767110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++T  E+ ++++++ +lG++ W++Ia +++ gRt++++k++w++
   XP_026411253.1  67 RGAFTDMEENQIIQLHSRLGNR-WSKIAGHFP-GRTDNEIKNHWNT 110
                      89********************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MGRQPCCEKV GLKRGPWTIE EDHKLMHFIL NNGIHCWRTV PKLAGLMRCG KSCRLRWINY  60
LRPDLKRGAF TDMEENQIIQ LHSRLGNRWS KIAGHFPGRT DNEIKNHWNT RVKKKLKQLG  120
LDPVTHKPIN NELSREKCEE VDGEYNSQSN DNTEVDDQEQ SFELKPQSTS NPVPKKIQVM  180
TTQNINEDMP ELDNGRNTTN NIFPSQEMWW NINYDGFDQN NNMGSSSVDS SVLNPSFSLE  240
DSSLNTNNNN YNPNSVGECS SHMQQQQLHQ QNQQQQLEYM YSQTWIGSNV DAFLSWDGFH  300
HFEEVMFPPF QKSPTIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.13e-83MYB family protein