PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026411288.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 252aa    MW: 26226.7 Da    PI: 7.5026
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026411288.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260128.33.5e-40301301100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+ael
  XP_026411288.1  30 PCGACKFLRRKCVNGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHIPVHRRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAEL 124
                     7***********************9989******************************************************************* PP

          DUF260  95 allkee 100
                      +l+++
  XP_026411288.1 125 TYLQAH 130
                     *99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MSANACSSSG GGGGASSGCG SGGNSSGGGP CGACKFLRRK CVNGCIFAPY FDSEQGAAHF  60
AAVHKVFGAS NVSKLLLHIP VHRRLDAVVT ICYEAQARLR DPVYGCVAHI FALQQQVVNL  120
QAELTYLQAH LATLELPSPS LPPSLLSPPP LSISDLPSAA TMPATFDLSA LFDPLVQPPW  180
TMQQQQQQQQ QQSRHSTDIV QQFGGGISRN LNDIPSAGGN GDLQSLAHEL LHRNGSLGVS  240
APLAGPSAPP PK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45420.18e-69LBD family protein