PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026411379.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GRF

Protein Properties

Length: 231aa MW: 25183.5 Da PI: 9.8004

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026411379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	81.1	1e-25	110	153	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 ++epgrCrRtDGKkWRCs++v++ +k+CErH+hrgr+rsrk++e XP_026411379.1 110 EPEPGRCRRTDGKKWRCSKDVVPEQKYCERHMHRGRNRSRKPVE 153 69***************************************987 PP
2	QLQ	55.9	1.3e-19	42	78	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s FT Qlq++++Q+l+yK++aa++PvP +L+++i+k XP_026411379.1 42 SVFTFLQLQEFEHQALIYKHMAAGVPVPFHLVVPIWK 78 67*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MEGEKSILRS PPPLPPAATN TKALLQLDLE LGPRLMTNGK SSVFTFLQLQ EFEHQALIYK 60 HMAAGVPVPF HLVVPIWKSL ASSFGSLHSG LYPSFMGCKG IYFDYKNSME PEPGRCRRTD 120 GKKWRCSKDV VPEQKYCERH MHRGRNRSRK PVEIPYQNAA SSSSSTANAA NGNTGLSISI 180 PLQLMANNSS CTTTSTSNNN TTTTTAATAT GLDFSPKSVL QNGGNNSKNE S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	2e-36	GRF family protein