PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026411435.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HSF
Protein Properties Length: 198aa    MW: 23035 Da    PI: 10.0812
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026411435.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind106.81.8e-33301302103
                     HHHHHHHHHC........TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXX CS
    HSF_DNA-bind   2 Flkklyeile........deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkk 88 
                     Fl+k+ye+le        d++ ++++sw+++g+ fvv+ ++ef++ +LpkyFkh+nf+SF+RQLn+YgFkk+  ++         weF+h++F k
  XP_026411435.1  30 FLSKTYELLEehfrggdsDDDQHKIVSWNSTGTGFVVWSPQEFSEVLLPKYFKHKNFSSFIRQLNTYGFKKIAANR---------WEFQHEKFFK 115
                     9*********7777777777****************************************************9998.........********** PP

                     XXXXXXXXXXXXXXX CS
    HSF_DNA-bind  89 gkkellekikrkkse 103
                     g ++ll +i rkkse
  XP_026411435.1 116 GGRHLLAEITRKKSE 130
                     ************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MRMSTDVSPS GRVLNRTSSS SSRTRTPTPF LSKTYELLEE HFRGGDSDDD QHKIVSWNST  60
GTGFVVWSPQ EFSEVLLPKY FKHKNFSSFI RQLNTYGFKK IAANRWEFQH EKFFKGGRHL  120
LAEITRKKSE SSAYPAFLKA SEKQFNGLGE NSNLLTKDNE ILRRNNLELQ LQISQFKILE  180
MKLLDCLSQY TVWQHQQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.15e-37HSF family protein