PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026411661.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 249aa    MW: 28455.9 Da    PI: 4.4897
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026411661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF69.23.8e-222771145
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    ++i++ks+ qvtfskRr+g++KKA ELS+L++a+va+i fs+ gk
  XP_026411661.1 27 EKIKDKSRLQVTFSKRRKGLFKKATELSILTGAQVALIAFSPAGK 71
                    579****************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MMMNQVTMIE MKTQKKGGDG RKRIKIEKIK DKSRLQVTFS KRRKGLFKKA TELSILTGAQ  60
VALIAFSPAG KPYVCGNPDL LLDRFVNGEA SEIHQRDHND PEQRRYMEVE QELEAEKKRG  120
VFLESLINCD LGVGNDKSWW DTYVDGLSLD ELKQMKSDME QLQKCVAQRS NDLKMNNNTA  180
SSSSSYEDKS LALMNLPAGN DDIVDDDYLN EEMVNELVFG FDPQEYDFGT TTSTDQEITA  240
DMFSDDYYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.14e-25M-type_MADS family protein