PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026411667.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 233aa    MW: 25305.3 Da    PI: 7.2342
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026411667.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260120.59.5e-3821116195
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+k+C++apyf +eq + +fa+vhk+FGasnv+kll +lp ++r da+ +++yeA  r+rdPvyG+vg+i++lqqq e + +++
  XP_026411667.1  21 PCGACKFLRRKCVKGCIFAPYFDSEQgSTHFAAVHKIFGASNVSKLLLRLPAHKRVDAVVTICYEALSRIRDPVYGCVGHIFALQQQAELAFVQA 115
                     7***********************9988**********************************************************998766655 PP

          DUF260  95 a 95 
                     +
  XP_026411667.1 116 H 116
                     5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MMMSSGSSSS SSSSSNGGNG PCGACKFLRR KCVKGCIFAP YFDSEQGSTH FAAVHKIFGA  60
SNVSKLLLRL PAHKRVDAVV TICYEALSRI RDPVYGCVGH IFALQQQAEL AFVQAHLSTL  120
ELTSHQQHSL VSSPTPSSAL TTVHASSDML SSETSNMSTL FTSYQSQHQQ LDGIPTMLDT  180
RRYCSPPTIA AQNQQQQNNV EGDGDLQTLA REFLSIYFPE SAKLQTSNDS NSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45410.11e-57LBD family protein