PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026411755.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 190aa MW: 21195.5 Da PI: 10.156

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026411755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	138	2.7e-43	67	143	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+e+C++dlseak+yhrrhkvCe+hskapvv+v+gl+qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk+++ XP_026411755.1 67 CQAENCNVDLSEAKRYHRRHKVCEHHSKAPVVIVAGLRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRRKSSS 143 **************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MKSSRVDGGK RSLKEKSKKD DDVVDEEGFG SCDDDKRKKA SSYFTSSKKG SSSLGGGGGS 60 GGIALPCQAE NCNVDLSEAK RYHRRHKVCE HHSKAPVVIV AGLRQRFCQQ CSRFHELSEF 120 DETKRSCRRR LAGHNERRRK SSSESHGEGS SRKGVTGTQL KENHCRQADQ NGRLPANLPE 180 NSTYKHFQIR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15270.1	1e-34	SBP family protein