PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026411794.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 237aa MW: 27360.5 Da PI: 6.9173

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026411794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.7	2.4e-17	12	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++lv+ v ++G ++W+ Ia+ g++Rt+k+c++rw +yl XP_026411794.1 12 KGPWTEQEDLQLVCFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYL 59 79********************************************97 PP
2	Myb_DNA-binding	54.8	2.2e-17	65	110	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr+T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++ XP_026411794.1 65 RGRMTPQEERLVLELHSRWGNR-WSRIARKIP-GRTDNEIKNYWRTHM 110 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MKMVQTEDHI RKGPWTEQED LQLVCFVGLF GDRRWDFIAK VSGLNRTGKS CRLRWVNYLH 60 PGLKRGRMTP QEERLVLELH SRWGNRWSRI ARKIPGRTDN EIKNYWRTHM RKKAQEMRKR 120 GTAMTSIASS STITTMTESP TKSENVPGIS NRFPGNEGSC NTTDIDVNGE RDISEEEDYS 180 MDRIWDEIAS PEDEVNSGQF FDERSNSSNN NKEVGCSFPC APMASPLWDV GSYGWDW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	6e-74	MYB family protein