PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026411891.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 349aa MW: 39912 Da PI: 6.578

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026411891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	99.4	2.2e-31	103	204	1	98
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 f+k ltpsdv+k++rlv+pk++ae++ +g+ ++ lt+ede g+ W+++++y+++s++yvltkGW++Fvk+++L +gD+v F++ +r + XP_026411891.1 103 FEKPLTPSDVGKLNRLVIPKQYAEKYfplsgdSGD--KGLLLTFEDELGKFWRFRYSYWNSSQSYVLTKGWSRFVKEKHLGAGDIVSFER-RRfD 194 99*************************965444..6779**********************************************6.5559 PP EE..EEEEE- CS B3 89 efelvvkvfr 98 ++l+++++r XP_026411891.1 195 VQRLYIRWRR 204 9999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MMYHPTPKTP SSKYKTVVAP QPNERFGSQI YENHHRVWLE PYDTQPASST TTMNEATLNA 60 QHIPYRDLNM INFEYDEEDD TSVEVVDQQE EMERENDERE YMFEKPLTPS DVGKLNRLVI 120 PKQYAEKYFP LSGDSGDKGL LLTFEDELGK FWRFRYSYWN SSQSYVLTKG WSRFVKEKHL 180 GAGDIVSFER RRFDVQRLYI RWRRGGSMPV QDNGVGQTAI SSSAPPSNSN ANTTTGSWTR 240 LFYSAHPYPS HHLHGPDYYQ PDHCLHAGYA AEKVVAEKPK AKQGNSKRLR LFGVNLDCQL 300 DEPDVSPFSN PVPTQVVYSH GDGSNHKDYN YSTSLNQRGN AGRGSGSDL

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MMYHPTPKTP SSKYKTVVAP QPNERFGSQI YENHHRVWLE PYDTQPASST TTMNEATLNA  60
QHIPYRDLNM INFEYDEEDD TSVEVVDQQE EMERENDERE YMFEKPLTPS DVGKLNRLVI  120
PKQYAEKYFP LSGDSGDKGL LLTFEDELGK FWRFRYSYWN SSQSYVLTKG WSRFVKEKHL  180
GAGDIVSFER RRFDVQRLYI RWRRGGSMPV QDNGVGQTAI SSSAPPSNSN ANTTTGSWTR  240
LFYSAHPYPS HHLHGPDYYQ PDHCLHAGYA AEKVVAEKPK AKQGNSKRLR LFGVNLDCQL  300
DEPDVSPFSN PVPTQVVYSH GDGSNHKDYN YSTSLNQRGN AGRGSGSDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06250.2	6e-50	B3 family protein