PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026411936.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 243aa MW: 28119.3 Da PI: 7.3899

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026411936.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.5	2e-17	80	130	6	56
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ +q+e Le+ F+++ ++ e++ +LA++lgL+ r+V vWFqNrRa++k XP_026411936.1 80 RMRWDQIESLERSFQEEIKLEPERKIKLAQELGLQPRKVAVWFQNRRARWK 130 56679*********************************************9 PP
2	HD-ZIP_I/II	109.2	2.9e-35	76	167	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 e+krr+ +q+++LE+sF+ee kLeperK +la+eLglqpr+vavWFqnrRAR+k+k+lE+ y++Lk+++d++++e+ +L++ev +L+ +l+ XP_026411936.1 76 ERKRRMRWDQIESLERSFQEEIKLEPERKIKLAQELGLQPRKVAVWFQNRRARWKAKNLERLYDSLKQEFDTVSREKLKLQEEVMKLKMKLD 167 69**************************************************************************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MAWNETVKPL MASGVGGEHT VAFLYDYNYH PFPGGHHQAG EVERTHLSNN NNHNSNSNSN 60 SSNNNSAHDE NNNHAERKRR MRWDQIESLE RSFQEEIKLE PERKIKLAQE LGLQPRKVAV 120 WFQNRRARWK AKNLERLYDS LKQEFDTVSR EKLKLQEEVM KLKMKLDRQA QMIQGSRGSK 180 DVLMEPEETV ESKSVVISNS STMLQGATYH QTAGDCNYTF NLDDYIQGSL PYMGILHGYP 240 NTY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	77	106	RKRRMRWDQIESLERSFQEEIKLEPERKIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	7e-41	HD-ZIP family protein