PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026412166.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 422aa MW: 47621.6 Da PI: 7.947

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026412166.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	41.6	2.2e-13	63	152	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k +++s+v+ +l lp kf+ + ++k +++ tl de+g++++ ++ ++ l++GW+ F a++L +gD +vF+l++ s f +v XP_026412166.1 63 FIKLMLRSHVSGCFWLGLPSKFCLSS-LPK-NDTLFTLVDEDGEEYTANY--LPRK--WGLSGGWRAFSIAHKLVAGDALVFHLVKVSIF--KVY 149 89*******************777.333.5679***********..5555..349*********************998888..777 PP EE- CS B3 96 vfr 98 ++r XP_026412166.1 150 IVR 152 766 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MKRKQIMPTS SAMIITNCSP SKVVGSPKKR KASRSITKVE NYKSTEEQAK EIQSSLDPTC 60 PSFIKLMLRS HVSGCFWLGL PSKFCLSSLP KNDTLFTLVD EDGEEYTANY LPRKWGLSGG 120 WRAFSIAHKL VAGDALVFHL VKVSIFKVYI VRTHTLAEVD AALDILTLES NTEGSETGGK 180 DMKKSKKRAQ KLVHFRSPVV LSEDQNVKLP LAGSDQPEDH TSEEVIDSEV PEGIQHLGSV 240 VESREIKNFE SFVISVNNLT IDSEIPEHVR AKYYELCRSQ NTFLHENLMV GLNPKLVAGM 300 ISEIVNLADA VRASKHSTRR EEFEAWENSL KAFKQLGMNV AFLLSRLSKL LKLLSESEEA 360 FDLKRYNEAM NGKNRVKGET TTLEMQILEL KNDSTRLDTE IKTLKLQAEK HESTFKSEFW 420 IY

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MKRKQIMPTS SAMIITNCSP SKVVGSPKKR KASRSITKVE NYKSTEEQAK EIQSSLDPTC  60
PSFIKLMLRS HVSGCFWLGL PSKFCLSSLP KNDTLFTLVD EDGEEYTANY LPRKWGLSGG  120
WRAFSIAHKL VAGDALVFHL VKVSIFKVYI VRTHTLAEVD AALDILTLES NTEGSETGGK  180
DMKKSKKRAQ KLVHFRSPVV LSEDQNVKLP LAGSDQPEDH TSEEVIDSEV PEGIQHLGSV  240
VESREIKNFE SFVISVNNLT IDSEIPEHVR AKYYELCRSQ NTFLHENLMV GLNPKLVAGM  300
ISEIVNLADA VRASKHSTRR EEFEAWENSL KAFKQLGMNV AFLLSRLSKL LKLLSESEEA  360
FDLKRYNEAM NGKNRVKGET TTLEMQILEL KNDSTRLDTE IKTLKLQAEK HESTFKSEFW  420
IY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	2e-40	B3 family protein