PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026412649.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 754aa    MW: 85300.3 Da    PI: 6.1603
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026412649.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS385.65.9e-1183817521374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+av+++d + a +lL+++++++sp gd  qRla++f+ +L+arla+++s+ly++l  ++ts    ++ l+a++l+  ++P+ k+s+
  XP_026412649.1 381 LRTLLIHCAQAVAADDRRTAGELLKQIRQHSSPFGDGSQRLAHCFADGLEARLAGTGSQLYSTLLFKKTS---ATDILKAYQLYMAACPFKKISN 472
                     6789**************************************************************9999...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +  Nq+  + +e+++++Hi+Df+i  G+QWp+L+q L++R++gpp+lRiTg++ p++g   +e++eetg rL+ +Aee++vpfe+++ +a+++e+
  XP_026412649.1 473 FFSNQTFSDLAETATTLHIVDFGILWGFQWPCLIQRLSNRKGGPPKLRITGIDFPQPGfrPAERVEETGLRLRAYAEEFKVPFEYHA-IAQKWET 566
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L+++++E l+Vn+++++ +llde+v l+s+r++vLklvk+++P v+v+   +   +++ F++rf eal +ys+lfd+lea++pre+ er+
  XP_026412649.1 567 IQFEDLKINKDELLVVNCMYRMRNLLDETVILDSPRNAVLKLVKKMNPAVFVHGIVNGAFSAPFFVTRFREALFHYSSLFDMLEANVPREHPERA 661
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +E +l+g+e+vnv+aceg+er+er et+++W+ r  +aGF ++pl+++++k++k   ++ + + + v+e+s++++lgWk+r ++++S+Wr
  XP_026412649.1 662 LLEGRLFGKEAVNVIACEGSERVERPETYKQWQVRNVRAGFVQLPLKKDIMKKVKDKAKELYHKDFVVDEDSQWMLLGWKGRIIYALSSWR 752
                     **************************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 754 aa     Download sequence    
MVMDPSVFDS INGLRVNTES ESDESLVSFF RLEEYSLGQN LMDQSPNFSS NTSGIATSSS  60
SSSSSNVSPS SPEEYDFSDV VLKYINQMLM EEDIEEKNCM FQEASALQAA GKPFYEILGE  120
KPPSPHHNAP LYADHHYPEN QLQNFAHYPA QSNNSSNGSN NAVEINWIGE LGEYRSLFDT  180
QSIPSDYTFQ ASPQSSFNPS NGFDSVAEVL VESPPVAKVQ VPDMFCESEP IWQFRKGVEE  240
ANKFLPNGNN LLLNLESNAL FNNERKKEEA GDVLVKLEKK DERETSPNGS RGKKNVHREE  300
IDVEEGRSYK QSAVFSEETI RNSMLDMVLL CKGENDKANI TLRQSIKIEA NKNLQQNGQS  360
KGSNGKSRGK KQTAKRDVVD LRTLLIHCAQ AVAADDRRTA GELLKQIRQH SSPFGDGSQR  420
LAHCFADGLE ARLAGTGSQL YSTLLFKKTS ATDILKAYQL YMAACPFKKI SNFFSNQTFS  480
DLAETATTLH IVDFGILWGF QWPCLIQRLS NRKGGPPKLR ITGIDFPQPG FRPAERVEET  540
GLRLRAYAEE FKVPFEYHAI AQKWETIQFE DLKINKDELL VVNCMYRMRN LLDETVILDS  600
PRNAVLKLVK KMNPAVFVHG IVNGAFSAPF FVTRFREALF HYSSLFDMLE ANVPREHPER  660
ALLEGRLFGK EAVNVIACEG SERVERPETY KQWQVRNVRA GFVQLPLKKD IMKKVKDKAK  720
ELYHKDFVVD EDSQWMLLGW KGRIIYALSS WRPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein