PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026412851.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 251aa MW: 28710.4 Da PI: 8.7853

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026412851.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	98.9	2.1e-31	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ XP_026412851.1 9 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYA 58 79***********************************************8 PP
2	K-box	117.4	1.3e-38	82	172	9	99
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ea+++ +qqe++kL+++i Lq+++Rhl+Ge L+s+s+keL+qLe +Lek++++iRskKnell+++ie++qk+e +lq++n++Lr+k++ XP_026412851.1 82 ASEANTQFYQQEATKLRQQIGILQNSNRHLMGEALSSMSVKELKQLEGRLEKGISRIRSKKNELLFAEIEYMQKRELDLQNDNMYLRAKIA 172 7899*************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFSN RGRLYEYANN 60 SVKSTIDRYK KTCADPSSTI CASEANTQFY QQEATKLRQQ IGILQNSNRH LMGEALSSMS 120 VKELKQLEGR LEKGISRIRS KKNELLFAEI EYMQKRELDL QNDNMYLRAK IADNERAGQQ 180 MNLMPGNEYD VMTSSAYDSR NFLQVNNLLE SANHHYSRQE QTALQLGAKI EDIKPLEYSS 240 YGFGGEEAYG S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18960.1	1e-110	MIKC_MADS family protein