PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026412918.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 425aa MW: 48542 Da PI: 7.8478

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026412918.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.4	9.8e-17	62	151	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f kv+ +s v+ ++ +p++f+ ++ ++e+++ltl e+g ++ v++ +++++ l++GW +F+ an L +gD++vF+l++ ++f +v XP_026412918.1 62 FTKVMRQSQVSGGPWMKIPRNFCYSNL--PREKVDLTLLVEDGDEFIVRF----YPRMFALSGGWDHFATANMLIAGDVLVFQLVKATKF--KVY 148 89*******************7774..56789************....9999************************987777..888 PP EE- CS B3 96 vfr 98 ++r XP_026412918.1 149 IVR 151 776 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MHFDITLAEP EDLVPCIRVV AYPMKNKSSR TRSVNNIYRP KSLAQEQAEE IQSSLSQRYP 60 SFTKVMRQSQ VSGGPWMKIP RNFCYSNLPR EKVDLTLLVE DGDEFIVRFY PRMFALSGGW 120 DHFATANMLI AGDVLVFQLV KATKFKVYIV RGNGSMDVDV ALDPPEFPVP AKENDLEDDV 180 YIKDLMPIQL YTRKRVKSHP SAPILGDAQM CVLSLEPPPM DHNNEVVDDS EVLKGMKLSD 240 SIVEFQDVGS FRSFRIAVNG LIIDSEITEY VRTKYYELCC SQKAFLHKHL APRLNSKLVA 300 GIISETVNIS DAIRASTLDT PKDKFESWAR GLDAFGKLGM NVGFLVSRLN KLIKLAFDSE 360 QAFEYKRYRD IMSRKNHVVE EITSLEMKVL RLKNDSRRLE KDIKCLELDA QKHILTFRKE 420 AASPW

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MHFDITLAEP EDLVPCIRVV AYPMKNKSSR TRSVNNIYRP KSLAQEQAEE IQSSLSQRYP  60
SFTKVMRQSQ VSGGPWMKIP RNFCYSNLPR EKVDLTLLVE DGDEFIVRFY PRMFALSGGW  120
DHFATANMLI AGDVLVFQLV KATKFKVYIV RGNGSMDVDV ALDPPEFPVP AKENDLEDDV  180
YIKDLMPIQL YTRKRVKSHP SAPILGDAQM CVLSLEPPPM DHNNEVVDDS EVLKGMKLSD  240
SIVEFQDVGS FRSFRIAVNG LIIDSEITEY VRTKYYELCC SQKAFLHKHL APRLNSKLVA  300
GIISETVNIS DAIRASTLDT PKDKFESWAR GLDAFGKLGM NVGFLVSRLN KLIKLAFDSE  360
QAFEYKRYRD IMSRKNHVVE EITSLEMKVL RLKNDSRRLE KDIKCLELDA QKHILTFRKE  420
AASPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	2e-26	B3 family protein