PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026413007.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 483aa    MW: 54259.4 Da    PI: 8.4421
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026413007.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.26.8e-1457144298
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     +k +++s+v +  +l l  kf+++  ++   ++++tl  e+g++++ ++    +  ++ l++GW++F+ a++L egD +v++l++ ++f  +v +
  XP_026413007.1  57 VKLMLRSHVVQGFWLGLTSKFCSTLPKN---DTEVTLVGEDGEEYTANY--LPR--KFGLSGGWRGFATAHKLVEGDALVLQLVEATKF--KVYI 142
                     68999*****************888544...568***************..554..588***********************9987777..8887 PP

                     E- CS
              B3  97 fr 98 
                     +r
  XP_026413007.1 143 VR 144
                     76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 483 aa     Download sequence    
MKSSSAMVTT HSLSKVIASG KKNDVRLMTE VEKPKSLVEV RAEEIQFGLD PQFPSLVKLM  60
LRSHVVQGFW LGLTSKFCST LPKNDTEVTL VGEDGEEYTA NYLPRKFGLS GGWRGFATAH  120
KLVEGDALVL QLVEATKFKV YIVRAHSLAN VEVASSLLKS GIPAKGSDQA DAEERKTGIK  180
YTRKHILCRP AVPLIGEDQH IVPPLKSCKE MKMTKSPAQK HVKSHLSVPF LGDDQDATLP  240
TSGPKETTAT DDPIRKRVKF HPSVLHLGGD QNITLPLSSS KQPEDQSNRK DTEVLEGIKR  300
LDSSVEIRDV TDLESFTITV NGWIIDPEMS ENYRSKYYEL CRSQKTYLHK NLMQGVNSKL  360
VAGIICETVD IADAIRASEL GTPKDDFKAW RKSLIGFKHL GMNVDVLLSR IDILLKLMME  420
AEDSFDYNET MVRRNRVKRE IAALDMKILE LRNEAVRLER EVKALQVNEE KHEAFYSVVR  480
SPW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1433440RRNRVKRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-34B3 family protein