PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413111.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 378aa MW: 42475.4 Da PI: 5.9368

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	37	6e-12	23	96	17	98
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 lp kf+++ ++k ++++ tl de+g++++ ++ ++ ++GW++F ka++L egD +vF+l++ s f +v ++r XP_026413111.1 23 GLPAKFCSSS-LPK-SDTKFTLVDEDGEEYTANY--LPQK--LGSSGGWRGFSKAHKLVEGDALVFHLVDVSIF--KVYIVR 96 59***666.443.6679***********..4444..44689*******************988888..777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MKRKQIIRTS SAMIIMDCSP SKGLPAKFCS SSLPKSDTKF TLVDEDGEEY TANYLPQKLG 60 SSGGWRGFSK AHKLVEGDAL VFHLVDVSIF KVYIVRSHTS ADVDTSPDLL KLECNTEGSD 120 TGTMDKKKSK KGAQKLVKFH PTIVLDEDEK LDAPSEGSHQ PEDRSSEEVI DSDVPEGIKL 180 LGYMDEFQEM KNLESFTVAV NDLAIDLEIP EHIQSKYYEL CRSQNTSLHK DLVMGSNSTL 240 VVGIISEVVN LAEGIRACKL STPREELEAW ENNLKAFKQL GMNVGFLLSR VGKLLELSSK 300 SEQAFDLKRY NEAMEGKNRV NGEITTLEMK ILEVRNDSMR LDRDIRTLKL QAEKFELAFK 360 NEVSSPRFLW IGHTKKAR

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MKRKQIIRTS SAMIIMDCSP SKGLPAKFCS SSLPKSDTKF TLVDEDGEEY TANYLPQKLG  60
SSGGWRGFSK AHKLVEGDAL VFHLVDVSIF KVYIVRSHTS ADVDTSPDLL KLECNTEGSD  120
TGTMDKKKSK KGAQKLVKFH PTIVLDEDEK LDAPSEGSHQ PEDRSSEEVI DSDVPEGIKL  180
LGYMDEFQEM KNLESFTVAV NDLAIDLEIP EHIQSKYYEL CRSQNTSLHK DLVMGSNSTL  240
VVGIISEVVN LAEGIRACKL STPREELEAW ENNLKAFKQL GMNVGFLLSR VGKLLELSSK  300
SEQAFDLKRY NEAMEGKNRV NGEITTLEMK ILEVRNDSMR LDRDIRTLKL QAEKFELAFK  360
NEVSSPRFLW IGHTKKAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	6e-27	B3 family protein