PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026413136.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 279aa    MW: 31678 Da    PI: 10.2568
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026413136.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.55.7e-19130218298
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     +k +++s+v    +l +p++f++++   +ee++t++lede+g +++  +i +k++    l++GWk F+k+++L++gD +vF+l++ ++f  +v++
  XP_026413136.1 130 VKSMLQSHVYHGFWLNVPNDFCQKYL--TEEKMTIVLEDEEGVEYDTIYIGEKTG----LSGGWKAFAKDHKLDDGDALVFELIKPTRF--KVHI 216
                     6999*******************995..34779****************555554....************************997777..9999 PP

                     E- CS
              B3  97 fr 98 
                     f+
  XP_026413136.1 217 FK 218
                     86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MADVNPYEEA RKQRLDENRR RFQDLGVDKI VKSLTPVAKP KPKAKPKSAT GAPVDPDLVR  60
RSSRPRNAAT SYAEEFIKDR PLRKKLRSGT STRVRKAHEK VATAAQRANA IKRAEDFRVQ  120
HVPSSHPSYV KSMLQSHVYH GFWLNVPNDF CQKYLTEEKM TIVLEDEEGV EYDTIYIGEK  180
TGLSGGWKAF AKDHKLDDGD ALVFELIKPT RFKVHIFKGI IDGVGEANTK KPKKVNRSKP  240
IKKVKNSDAE EEDTEEVAEQ IAKPRERQTR NSKKAGDDL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18288LRKKLRS
2230243KKPKKVNRSKPIKK
3233246KKPKKVNRSKPIKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.12e-45B3 family protein