PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026413182.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 572aa    MW: 64228.3 Da    PI: 5.9943
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026413182.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS314.13.1e-962125703373
            GRAS   3 elLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++L+++Ae v+ +dl+laq +Larl+++ ++p g+p+qR a yf+eAL++ l+    +l        +s+++ ++++ a+k+fse+sPi+ f+++
  XP_026413182.1 212 DQLIRAAESVELNDLHLAQMILARLNQTlQNPIGKPLQRTAYYFKEALQNYLNL---NLT---CNVLSSPSDIVQKIRAYKIFSEISPIPLFANF 300
                     68*************************99************************8...222...2333334569********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpeg....ppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     taNqa+lea +g+  +HiiDfdi+ G+QW++ +qa+ +++++     ps+RiT+++++e  s+ e + ++e+L++fA+elg++f+ ++++ +++e
  XP_026413182.1 301 TANQALLEASDGAMFIHIIDFDIGLGGQWASYMQAIVCKSKSrdfsFPSIRITAIVPEE--SSLEANLIRENLQQFARELGIRFQLEFVLYNSFE 393
                     *************************************8885434448**********66..99******************************** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adhnsesFlerflealeyysalfdsleaklprese 280
                      l + ++r+ +gE++aVnl+ +++rll+ s s++     + ++++++sP++vv+v++e   d++++sF + f++ le+ysal++sl+a  +++ +
  XP_026413182.1 394 LLLFGSIRFINGEMIAVNLSPSIFRLLSASDSITG----FFRFLRRISPQIVVFVDNEtcKDTENSSFRKNFINGLEFYSALLESLDAANSSDVN 484
                     ***************************66666666....*******************64455999********************999889999 PP

            GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                       + +E++l++++i+  v++  +         + Wre l+ aG+ pv+lse++++qa+ l+r+++ +g++v +++gs++l+W++r+Lvs+SaW
  XP_026413182.1 485 LVRRIEKFLIRPKIQTTVTAGRNC-------ISPWRELLSGAGMMPVALSEFTESQADWLVRRTNIRGFHVAKRQGSMLLCWHERELVSTSAW 570
                     99****************987765.......99************************************************************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    
MKSPFTAQNN NQFFSSPSSP SSSKPFTTTT TTTFTTNPLK NNQNTNSSTI TNSYEPLDLR  60
RSPSPVGGGG GGSDSVPGFT TFSSVSDESP HHHLNWNENH HQQQQTPLLP SEDWDSMIWD  120
LGNTFKVDDN KINILPQFGP FYEPSHSSPP LPPPPQFPTS SENPPFNSSF PVVKTEIHPD  180
HHQNHNNFHP GGVVVVDSID NSNLEFDCSQ LDQLIRAAES VELNDLHLAQ MILARLNQTL  240
QNPIGKPLQR TAYYFKEALQ NYLNLNLTCN VLSSPSDIVQ KIRAYKIFSE ISPIPLFANF  300
TANQALLEAS DGAMFIHIID FDIGLGGQWA SYMQAIVCKS KSRDFSFPSI RITAIVPEES  360
SLEANLIREN LQQFARELGI RFQLEFVLYN SFELLLFGSI RFINGEMIAV NLSPSIFRLL  420
SASDSITGFF RFLRRISPQI VVFVDNETCK DTENSSFRKN FINGLEFYSA LLESLDAANS  480
SDVNLVRRIE KFLIRPKIQT TVTAGRNCIS PWRELLSGAG MMPVALSEFT ESQADWLVRR  540
TNIRGFHVAK RQGSMLLCWH ERELVSTSAW MC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-121GRAS family protein