PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413275.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 245aa MW: 28591.8 Da PI: 5.8828

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413275.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3.1e-17	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEde+l+ v+++G ++W++Ia+ g++R++k+c++rw +yl XP_026413275.1 17 KGPWLEEEDERLATFVTLMGERRWDSIAKVSGLRRSGKSCRLRWMNYL 64 79********************************************97 PP
2	Myb_DNA-binding	49.4	1.1e-15	72	115	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + +eE+ +++++ +++G++ W++Iar+++ gRt++++k++w+++l XP_026413275.1 72 QMNAEEERIILQLQHRWGNK-WSKIARKLP-GRTDNEIKNYWRTHL 115 6789**************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MERVYQSVVV QEDIIRKGPW LEEEDERLAT FVTLMGERRW DSIAKVSGLR RSGKSCRLRW 60 MNYLRPDLKH GQMNAEEERI ILQLQHRWGN KWSKIARKLP GRTDNEIKNY WRTHLRKKTQ 120 TEEQEKDKAA KDALEPDFLS QTDVDHNENR TGIEHEVYAQ EDIMRPSEHS FDVSGLSPRN 180 VLAYSPYENH ILDWISSSES ATLTDNNVLK HNGQCGISSS DSWFNIAADS ILDFTSISLW 240 ESDKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	6e-61	MYB family protein