PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413347.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 255aa MW: 29238.9 Da PI: 6.5131

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413347.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.3	1.1e-22	77	167	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 ++Y +YA++ GF++r++++++s+ ++ ++ ++vCskeg+r ++ ++++ ++++r gCka l++ ++ +kw+vt+++ eHnH+l+ XP_026413347.1 77 DYYGAYARRNGFTIRVNRKRRSRIDEAVIGFDYVCSKEGFRPKRCLGEDRTILLSKQSRAGCKAILVIAYRReIKKWVVTNFVREHNHDLM 167 59****************************************9998889999***********99989************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MTLCSFATRS MTESTSHLGD LIGSNMVLDG ETFDDFEIED CDTTSRQDNQ LVELTVDVGP 60 SEPCIGMEFN SADDGKDYYG AYARRNGFTI RVNRKRRSRI DEAVIGFDYV CSKEGFRPKR 120 CLGEDRTILL SKQSRAGCKA ILVIAYRREI KKWVVTNFVR EHNHDLMGPA EVLVRRSSVK 180 ASTEDAKDKR IRELTSELYN ERQRFQRRCS AYEERCAAYK VNFGKILKDI ELHSEHLSVS 240 VSNILQTIKE VDDEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	1e-35	FAR1 family protein