PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413421.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 321aa MW: 36734.4 Da PI: 8.0988

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00017	14	33	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C+ Cg sF + +Lk+H++ XP_026413421.1 14 TCEECGASFQKPAHLKQHMQ 33 6*****************96 PP
2	zf-C2H2	17.3	1.3e-05	41	65	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp dC+ s++rk++L+rH+ H XP_026413421.1 41 FSCPvnDCHSSYRRKDHLNRHLLQH 65 89*******************9887 PP
3	zf-C2H2	14.3	0.00012	70	93	1	22
EEET..TTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt 22 ++Cp C++ F k n krHi XP_026413421.1 70 FSCPveGCNQKFAYKGNVKRHIED 93 89*******************975 PP
4	zf-C2H2	16.6	2.2e-05	111	135	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + C+ Cgk+F+ s L++H +H XP_026413421.1 111 HICQeiGCGKVFKYASRLRKHEESH 135 679999***************9988 PP
5	zf-C2H2	15.5	5e-05	202	226	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C +F +ksnL++H ++ H XP_026413421.1 202 KCSikGCECTFATKSNLNQHVKSvH 226 688889****************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MEIDEKEEAK PNNTCEECGA SFQKPAHLKQ HMQCHSLERP FSCPVNDCHS SYRRKDHLNR 60 HLLQHQGKIF SCPVEGCNQK FAYKGNVKRH IEDMHEDEGS SSSNSQGQTQ HICQEIGCGK 120 VFKYASRLRK HEESHVKLES VEAICCEPDC MKYFANNDCL KAHVQSCHQH VLCEVCGTKQ 180 LKKNMKRHMR GHEIAGSTER IKCSIKGCEC TFATKSNLNQ HVKSVHLQLR PFACRFPDCG 240 QRFSFKHVRD NHEKSGSHVY VHGDFQEADE HFQARAKGGR KRTCPTVETL LRKRVVPPSH 300 TDSALNYGSE YLAWLLSAED D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	181	187	LKKNMKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-123	C2H2 family protein