PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026413446.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 482aa    MW: 53525.7 Da    PI: 6.4137
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026413446.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.41.7e-1557147199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k + +s+v+   ++ lp  f++ +   + ++++ltl de+g+++ vk+     +  + l++GW++F  a++L egD vvF+l+g ++f  +v 
  XP_026413446.1  57 FIKLMRRSHVSGCFWMKLPSAFCNPNL--PSRDIDLTLLDEEGEEYMVKC--LAPK--FSLSAGWRGFSLAHKLAEGDAVVFHLIGAHKF--KVY 143
                     8999*******************6663..46889****************..4444..78**************************9999..888 PP

                     EE-S CS
              B3  96 vfrk 99 
                     ++r+
  XP_026413446.1 144 IVRA 147
                     7775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    
MKVKKEIPTS LTKVVTNSFK KKSRGTRLLT MIGKPKSPIL DKAEKIQTGL SPSYPSFIKL  60
MRRSHVSGCF WMKLPSAFCN PNLPSRDIDL TLLDEEGEEY MVKCLAPKFS LSAGWRGFSL  120
AHKLAEGDAV VFHLIGAHKF KVYIVRARGL ADVDLPHFLP NNDIPAQGSV QDGAGATERM  180
ITKKCTEKYQ VSHSAVPISG EDQHTEVMDT SSAENRGKVM NAANKSSAEN CTQSHPSAPF  240
LGGDKNSNLA PPGMNATNKS PAENCAESHH SDTDNQNHNL EQPEENGSVE AIDTEVSEGA  300
RLPEPIAGIQ EFTNLDSFTI IVNDMLIDPE ISEDVRSKYY ELCRSQKAYL HEHLMEGPNR  360
KIVTAIISDI VNIADAVRAI KLSTPTDIFE AWEKSLKFYK HVGMNVEFLL SRVGIHLQQA  420
LAFDYNSAVI EENRLKEEMT AREAKILELR NASMSLEREL TTLEGNREKH EAAFQSLVNS  480
SW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-37B3 family protein