PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026413544.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 244aa    MW: 27791.5 Da    PI: 4.8156
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026413544.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.7e-1360102754
                     HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       Er+RR+++N++++ Lr ++P+ +      K++Ka++ + A+eYI +L
  XP_026413544.1  60 VSERNRRKKLNDSLFALRAVVPNiS------KMDKASTIKDATEYIEEL 102
                     57*********************66......***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MELIDEEEDY NKLYWETNLF LQNDELQLDS WGLDEPISRY FGSSSPDGAA SPLVTAKNIV  60
SERNRRKKLN DSLFALRAVV PNISKMDKAS TIKDATEYIE ELHEQERVIQ SEITELESRK  120
LKKSVSDTVN LSKTKKKRID RAYDSSGSQT SSIESLQLRI HNMGDNIMVV SLTCDKKIDT  180
MLRLCEVFES LKLKIVKANI SVVSGRLWKT VYVEADEEEK DELKMKIEAA IAGLNDSQSP  240
NMSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.16e-81bHLH family protein