PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413597.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 421aa MW: 47515.7 Da PI: 9.4141

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413597.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.8	1.9e-18	61	150	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k+l++s+v+ s +l lpk f++ + +++++ ltl de+g +++vk+ r+ l++GW++F+ a++L egD +vF+l++ +f +v XP_026413597.1 61 FIKQLLRSHVSGSFWLKLPKAFCTPNL--PRKNILLTLLDEQGDEYTVKC---VA-PRFALSAGWSRFATAHKLVEGDALVFHLVEAYKF--KVY 147 89*******************8885..467899***********...33.3699*********************9987666..555 PP EE- CS B3 96 vfr 98 v+r XP_026413597.1 148 VVR 150 544 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MKLKREIPPR DLKRQTPFTI ESAVTNSFKK KSRGIVKPPK SAVLDKAEEI QSGLNPNYPS 60 FIKQLLRSHV SGSFWLKLPK AFCTPNLPRK NILLTLLDEQ GDEYTVKCVA PRFALSAGWS 120 RFATAHKLVE GDALVFHLVE AYKFKVYVVR ACGLADADLP CDLPSSDIPP QGSLRGAAGA 180 TGRKITKKST GNLTYHSGQH MVIPSTCGEV NATYGTPAEK HMESHPSIPF LKTKLEQHDE 240 HTSAVETEFF MSLDSFKIVV DGMLIDTEIS EDVRTKYHEL CCSQKSYLHK HLVEGLNRRI 300 IAEIISEIVN IVDAIRSSSK LSTPKDKFKA WEKSLKSCKH MGMNVDFLLA RVTILLQQSS 360 AFDYNAAVIE ENRLEEEIAA RRVKILELRN DWVRLERQLR NLKSNREKHE SAFQSIVNSP 420 W

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MKLKREIPPR DLKRQTPFTI ESAVTNSFKK KSRGIVKPPK SAVLDKAEEI QSGLNPNYPS  60
FIKQLLRSHV SGSFWLKLPK AFCTPNLPRK NILLTLLDEQ GDEYTVKCVA PRFALSAGWS  120
RFATAHKLVE GDALVFHLVE AYKFKVYVVR ACGLADADLP CDLPSSDIPP QGSLRGAAGA  180
TGRKITKKST GNLTYHSGQH MVIPSTCGEV NATYGTPAEK HMESHPSIPF LKTKLEQHDE  240
HTSAVETEFF MSLDSFKIVV DGMLIDTEIS EDVRTKYHEL CCSQKSYLHK HLVEGLNRRI  300
IAEIISEIVN IVDAIRSSSK LSTPKDKFKA WEKSLKSCKH MGMNVDFLLA RVTILLQQSS  360
AFDYNAAVIE ENRLEEEIAA RRVKILELRN DWVRLERQLR NLKSNREKHE SAFQSIVNSP  420
W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	2e-34	B3 family protein