PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413680.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 233aa MW: 27137.2 Da PI: 7.045

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413680.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.1	2.7e-10	23	71	3	48
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48 +WT + d+l+ +a+ +++ + +W +Ia++++ g+t+ ++ ++q +l XP_026413680.1 23 SWTRQQDKLFEQAIVMFPDEndphRWQKIANCVP-GKTASEVYQHYQVLL 71 5***************99**********.**********986 PP
2	Myb_DNA-binding	45.6	1.7e-14	129	173	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + +++G+g+W++I+r ++Rt+ q+ s+ qky XP_026413680.1 129 PWTEEEHRAFLYGLEKFGKGDWRSISRNAVQTRTPTQVASHAQKY 173 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MFQENISMNI YNNQFQSQSP SYSWTRQQDK LFEQAIVMFP DENDPHRWQK IANCVPGKTA 60 SEVYQHYQVL LADIKDIEEG RVELPSYYDD DVDDNKVVWE TESSPPLPGT MNNNNKTKQT 120 ESERKKGVPW TEEEHRAFLY GLEKFGKGDW RSISRNAVQT RTPTQVASHA QKYFLRLNAE 180 KKERKRSSIH DITTVEKASK VSIKPSDCPV QQMRTMDNLI GSYPRQGDYF GCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	2e-61	MYB family protein