PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026413700.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-YA
Protein Properties Length: 358aa    MW: 39617.7 Da    PI: 9.7062
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026413700.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA88.87.4e-28192248158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p++VN+KQy+rI++RR  Rak+++ kk+ +k rkpylheSRh hA+rR+Rg+gGrF
  XP_026413700.1 192 DGPIFVNSKQYRRIMQRRLCRAKAQHGKKV-AKVRKPYLHESRHLHAMRRARGCGGRF 248
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MTMHTLFSEH PMSIPNQTSP QSPLPPVHAH WWSAAGGLGS QLLYGESFGT NNQLMKLSSS  60
SPMDNNNHNN PSLRFGDQLT DVQHGIDLGP QYQQKENYYS APRQFTILPG DGREPLLKVQ  120
KALPFTSTLP EYALRQSSRP EYQACFGLGL GQPMIRPNYP NISPYYGMYA TYGGYQTTAG  180
RVMLPLNVNT EDGPIFVNSK QYRRIMQRRL CRAKAQHGKK VAKVRKPYLH ESRHLHAMRR  240
ARGCGGRFLT KNASAGKGGT GIDDIQLSQL SGSLMSEVAH SDSRNANSSE GNGNISTLSG  300
SEVTSIYSRG DLYYFQIDPL RLTGFHSLPN MIDSGAQVLS MSNKWVTVPE GYGDLLKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.33e-41NF-YA family protein