PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026413776.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 842aa    MW: 92455.4 Da    PI: 6.0766
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026413776.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox581.7e-182986457
                    -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_026413776.1 29 YVRYTSEQVEALERVYAECPKPSSMRRQQLIRECpilcNIEPKQIKVWFQNRRCREKQ 86
                    5789****************************************************97 PP
2START161.56.2e-511673732203
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+ + +++g++++ +++ s+++sg a+ra+g+v  +++   +e+l+d++ W +++++ e++     g  g+++l 
  XP_026413776.1 167 IAEETLAEFLSKATGTAVDWVQIPGMKPGPDSVGIVAISHTCSGVAARACGLVSLEPM-KIAEILKDRPSWFRDCRSLEVVTSFPVGkgGTIELV 260
                     7899******************************************************.7777777777************99877777****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++l+p Rdf+++Ry+ +l++g++v++++S++     p+     ++vRae+lpSg+l++++++g+s +++v+hvdl++++++++lr+l+
  XP_026413776.1 261 YMQMYAPTTLAPaRDFWTLRYTTTLEDGSLVVCERSLSGSGAGPNasaANQFVRAEMLPSGYLVRSCEGGGSIIHIVDHVDLEAWSVPEVLRPLY 355
                     **************************************9999998888899******************************************** PP

                     HHHHHHHHHHHHHHTXXX CS
           START 186 ksglaegaktwvatlqrq 203
                     +s+ + ++k++v++l++ 
  XP_026413776.1 356 QSSKVIAQKMTVSALNHI 373
                     **************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 842 aa     Download sequence    
MAMVLTPHRE NSGGGGGSIS KHLDAAGKYV RYTSEQVEAL ERVYAECPKP SSMRRQQLIR  60
ECPILCNIEP KQIKVWFQNR RCREKQRKES SRLQTVNRKL TAMNKLLMEE NERLQKQVSE  120
LVYENAYMRQ QLQNASAATT DASCESVVET PQHTLRDANN PAGLLSIAEE TLAEFLSKAT  180
GTAVDWVQIP GMKPGPDSVG IVAISHTCSG VAARACGLVS LEPMKIAEIL KDRPSWFRDC  240
RSLEVVTSFP VGKGGTIELV YMQMYAPTTL APARDFWTLR YTTTLEDGSL VVCERSLSGS  300
GAGPNASAAN QFVRAEMLPS GYLVRSCEGG GSIIHIVDHV DLEAWSVPEV LRPLYQSSKV  360
IAQKMTVSAL NHIRQVAQET SGEVVYGLGR QPAVLRTFSQ RLSRGFNDAL NGFNDDGWSL  420
MTCDGAEDVI MSVNTTKNVG TINCPTNVLP VSGGTLCVKA SMLLQNVPPA LLIQFLREHR  480
SEWADYNIDA YSAASVKSSD HSFPGLRPTR FSGSQIIMPL GHTVEHEESL EVIRLEGHAL  540
TQEEAVLSRD IHLLQICSGV DENAVGACSE LIFAPIDEMF PDDAPLLPSG FRIIPLDTKR  600
DTSTSHRTLD LASSLEVGLP TNRGTEDASR STSNMRSVLT IAFQFPFEYH LRENVATMAR  660
QYVRSVLSSV QRVAMAIAPS GLGPLLGPKL SPGSPEALTL AHWICQSYSY HVGAELLRSD  720
SEGGDSVLKQ LWHHQDAILC CSSKSLPVFT FANQAGLDML ETTLVALQDI TLDKIFDESG  780
RKSLCGDFAK LMEQGFVYLP GGICLSTMAR HISYEQAIAW KVLAEENTIH CLAFTFINWS  840
FV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein