PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413820.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 753aa MW: 83971.1 Da PI: 9.8683

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413820.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.6	3.8e-10	13	46	3	33
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...T CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...k 33 +W t+E++ll++avk++G+++W+++a+++ XP_026413820.1 13 SWGTWEELLLACAVKRHGTNNWESVANEIKnkkS 46 6****************************95440 PP

Sequence ? help Back to Top
Protein Sequence Length: 753 aa Download sequence
MEKIYKEEEE KISWGTWEEL LLACAVKRHG TNNWESVANE IKNKKSSSNF IVTPQNCKQK 60 YHDLHQRFMV NSEDVVDSEI IDHHKNDGMD DNLNHDNSRI PWLDELRKLR VAELRREVQE 120 HDVSIVSLQL KVKRLEEERE ESLKDKNDSD VKPDLLETRT KEEEEEEDGK KIETEPPRSP 180 SPIEITGKPV PGDESDRDNQ SFNESNSSDL KDGKTPEVEV EKLLEPVQTV TETKDHVLND 240 KPLGEDSCNG SSETIAKDSA VQVEKKSSET TILVRQTREP AELWESAAES KGGEEEGTKE 300 SSDVQSSASL SRKNGRRKIT SGSSSGEERE TEEVSPAIKR ISVKSEPLLG FLEMILSHKY 360 GSIFKSRLKS QETRKYKSFI RQHMDMETIR TRLKQGRYSS SCSQKFFRDL LLLFNNAIAF 420 YPKNSSESVA ATELRGLVSK EMLSRSSGSS SSRSQNNPSP GDPTPPKLQQ STPLMPKPDL 480 ELSDPLLPKS KPVGVIFACR KRSSISAKAA NSSKPAELKG SDQNVGEEKP VLAKKQKENS 540 SAVEEQIVFS KRKGERSASG MRSSRSNRNN NTNKNSPKNS NTVNLDPSSA RSSAKGGSCG 600 GDDTNSETRT EKDKKNNSNN ASTALTNTVA KKRSAANFLN RMKTTSSSSN NGKLLETLKN 660 SSSGNNSKGD KGWSNKEEKY RGRGSGSKKD EQVTKQSSSK RQAAQGSSPP KRSVGRPPKK 720 APPPPPPSSS KRTREREKEV EPEVRQPRKR TRR

Sequence ? help Back to Top

Protein Sequence Length: 753 aa Download sequence

MEKIYKEEEE KISWGTWEEL LLACAVKRHG TNNWESVANE IKNKKSSSNF IVTPQNCKQK  60
YHDLHQRFMV NSEDVVDSEI IDHHKNDGMD DNLNHDNSRI PWLDELRKLR VAELRREVQE  120
HDVSIVSLQL KVKRLEEERE ESLKDKNDSD VKPDLLETRT KEEEEEEDGK KIETEPPRSP  180
SPIEITGKPV PGDESDRDNQ SFNESNSSDL KDGKTPEVEV EKLLEPVQTV TETKDHVLND  240
KPLGEDSCNG SSETIAKDSA VQVEKKSSET TILVRQTREP AELWESAAES KGGEEEGTKE  300
SSDVQSSASL SRKNGRRKIT SGSSSGEERE TEEVSPAIKR ISVKSEPLLG FLEMILSHKY  360
GSIFKSRLKS QETRKYKSFI RQHMDMETIR TRLKQGRYSS SCSQKFFRDL LLLFNNAIAF  420
YPKNSSESVA ATELRGLVSK EMLSRSSGSS SSRSQNNPSP GDPTPPKLQQ STPLMPKPDL  480
ELSDPLLPKS KPVGVIFACR KRSSISAKAA NSSKPAELKG SDQNVGEEKP VLAKKQKENS  540
SAVEEQIVFS KRKGERSASG MRSSRSNRNN NTNKNSPKNS NTVNLDPSSA RSSAKGGSCG  600
GDDTNSETRT EKDKKNNSNN ASTALTNTVA KKRSAANFLN RMKTTSSSSN NGKLLETLKN  660
SSSGNNSKGD KGWSNKEEKY RGRGSGSKKD EQVTKQSSSK RQAAQGSSPP KRSVGRPPKK  720
APPPPPPSSS KRTREREKEV EPEVRQPRKR TRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	3e-31	MYB_related family protein