PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413977.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

DBB

Protein Properties

Length: 301aa MW: 32869.8 Da PI: 5.7024

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.2	1.1e-05	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C ++ H H+++pl XP_026413977.1 4 QCNSCEVAEANVLCCADEAALCWACDVKVHAAnklaskHQRIPL 47 7****99*******************66889999998876 PP
2	zf-B_box	29.7	1.3e-09	55	96	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + +kC+ ++e +fC +++ llC++C +++H H XP_026413977.1 55 QIPKCDICQEAVGYFFCLEDRALLCRKCDVSIHTAnsyvssH 96 779******9*******************554555556 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MKIQCNSCEV AEANVLCCAD EAALCWACDV KVHAANKLAS KHQRIPLSTS SSSSQIPKCD 60 ICQEAVGYFF CLEDRALLCR KCDVSIHTAN SYVSSHQRFL LTGVKVGLEP TQPVGLSTKE 120 KSDSVDKTVE RESQSVFRKD TSVSRNGRNG EVLSRQPGGD GSLHATKLSI SGGTTGGSMP 180 EWPLDDFFGL TDFTQNFGYM DNGTSKADSG KTGQSGFSPT LQVTDEDFDM DECLGKVPEI 240 PWMVPEVPSP PTASGLFWPK SFRNSPDNEL SVPDVSFSNQ RIPQSIRAQP NISNPKRQRQ 300 Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	3e-90	DBB family protein