PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026414213.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 187aa    MW: 21664.4 Da    PI: 8.8778
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026414213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR173.25.5e-2341123389
            FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     +++YAk+vGF vrk++++k+ ++g i +  +vC++ g++ + +k+     ++r+++r++Cka ++ ++++++kwe+t+l+l+HnH+ 
  XP_026414213.1  41 FKAYAKRVGFAVRKRTNRKN-EEGIIRSVAYVCNRAGNPVNMTKN---IVKPRKSNRCDCKAYVTARLDDEDKWEITQLKLDHNHTY 123
                     89**************9998.8888***************99888...99***********************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MVAASLDDAE KETGEKMQSN DEDEFYIGKK FETHLDLFSA FKAYAKRVGF AVRKRTNRKN  60
EEGIIRSVAY VCNRAGNPVN MTKNIVKPRK SNRCDCKAYV TARLDDEDKW EITQLKLDHN  120
HTYNPSLGRH YRQHRKVEPH VLHTIDLNDQ SGIPVEKTFR SVVNQFGGFD KVDCNEKDFR  180
NALDVIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-16FAR1 family protein