PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026414450.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 825aa    MW: 91571.9 Da    PI: 6.8557
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026414450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4094.4e-1254618172374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      +lLl+cAe vs+g+  +a+a+L ++sel++p g++ qR+aayf eA++arl++s  +ly+ l+  +t+   s+++++a+++f+ +sP++kfsh+
  XP_026414450.1 461 LTLLLQCAESVSTGNIDEANAMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSEIQLYAPLSKGPTH---SQKVASAFQVFNGISPFVKFSHF 552
                     579*********************************************************999988888...99999****************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                     taNqaI ea+e+e+rvHiiD+di+qGlQWp L++ LasRp+gpp +R+Tg+g     s ++le+tg+rL++fAe+lg+pfef + +a+++ +l++
  XP_026414450.1 553 TANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGT----SMDALEATGKRLTDFAETLGLPFEFIP-IAEKVGNLDI 642
                     *****************************************************....***************************.7********* PP

            GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
                     e+L+v+++Ea+aV++ +  h+l+d ++s ++    +L l+++l Pkvv++veq+++h +++Fl rf+ea++yysa+fdsl a++++eseer+ vE
  XP_026414450.1 643 ERLNVSKREAVAVHWLH--HSLYDVTGSDNN----TLFLLQRLAPKVVTMVEQDLSH-AGTFLGRFVEAIHYYSAMFDSLGASYGEESEERHIVE 730
                     ****************9..999999999999....**********************.899********************************** PP

            GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++ll+rei+nv+a  g +r  +++ +++Wre+l+++GF+ ++l  +aa+qa lll +++ dgy++ e++g+l lgWkd  L+++SaWr
  XP_026414450.1 731 QQLLSREIKNVLAVGGPSRSGETK-FQNWREKLKQSGFRGMSLAGNAATQATLLLGMFPCDGYTLLEDNGTLKLGWKDLYLLTASAWR 817
                     *****************9777665.**************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 825 aa     Download sequence    
MAACVLLNNN NNNGSGNGNG SRIGGASGNS NSNSEDKNNS FTSSMQQQPQ QDPKMVRKRT  60
ASEMEVQLDN NNNQRISRRP NTSFTEIGRA ASMGYHPHHH PNPNANNIVS SSDNNNTNLN  120
PNNNNINITI PSNHSTSTTT TSSNILPSPS LNSLTSFNFP SSNFTYLDHH QQHHSNVVLP  180
SSPLLPSLPA VCNFSGLPLF PSEQENRIVH QNITSSAAAA QMDENNNNSA TTAWIDGIIK  240
DLINTTTNVS VPQLIQNVRE IIFPSNPNLA TLLEFRLRSL MVEPVLDHHQ QQQQHNINTD  300
NRRKEVMAYQ RQQQHHHQQI PLSPFPLSDH PSSSASPQIP SNNNQFLNWS LPNPSAQDLN  360
QQLHHQQQQN PIPSHMPPKH HYHQQQQQQP QPQQKPSPPP PQQQQQIPSP PQQQQSSPQA  420
VPATATTTPQ TPSPSVTQII ARDRREEMRQ QKRDEDGLHL LTLLLQCAES VSTGNIDEAN  480
AMLLEISELS TPFGTSAQRV AAYFSEAMSA RLVSSEIQLY APLSKGPTHS QKVASAFQVF  540
NGISPFVKFS HFTANQAIQE AFEREDRVHI IDLDIMQGLQ WPGLFHILAS RPGGPPFVRL  600
TGLGTSMDAL EATGKRLTDF AETLGLPFEF IPIAEKVGNL DIERLNVSKR EAVAVHWLHH  660
SLYDVTGSDN NTLFLLQRLA PKVVTMVEQD LSHAGTFLGR FVEAIHYYSA MFDSLGASYG  720
EESEERHIVE QQLLSREIKN VLAVGGPSRS GETKFQNWRE KLKQSGFRGM SLAGNAATQA  780
TLLLGMFPCD GYTLLEDNGT LKLGWKDLYL LTASAWRPIH SNIHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein