PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026414526.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARF

Protein Properties

Length: 715aa MW: 78498.5 Da PI: 6.6118

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026414526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.4	5.6e-23	119	220	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g+ W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF +++ XP_026414526.1 119 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVLAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNHKKLIAGDSIVFL--RTE 209 89**************************996555555..8999*****************************************..458 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_026414526.1 210 NGDLCVGIRRA 220 8999**997 PP
2	Auxin_resp	114.1	1.3e-37	283	366	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++Fe+vY+Prast+eF+vk++ v++a++v+++ GmRfkmafetedss++++ +Gt+++ + +dpv+Wp+S+Wr+L+ XP_026414526.1 283 AATLAANGQPFEIVYYPRASTPEFCVKASLVSTAMRVPWCGGMRFKMAFETEDSSRISWfMGTISSAQVVDPVHWPGSPWRLLQ 366 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 715 aa Download sequence
MQEMEKNLDS QLDSQLWHAC AGGMVQMPNV NSKVFYFPQG QAEHAHGNVD FGLSPSRVPP 60 LILCRVAAVK YMADPESDEV YSKIKLVPVR NNEPDYEDDG VANNGIGNGS EVQEKPASFA 120 KTLTQSDANN GGGFSVPRYC AETIFPRLDY SADPPVQTVL AKDVHGEIWK FRHIYRGTPR 180 RHLLTTGWST FVNHKKLIAG DSIVFLRTEN GDLCVGIRRA KRGIGGGQES LSGWNPAAGN 240 CASPYAGFSV FLREDDKRNG NGGNLKSGPR GKERVRPESV IEAATLAANG QPFEIVYYPR 300 ASTPEFCVKA SLVSTAMRVP WCGGMRFKMA FETEDSSRIS WFMGTISSAQ VVDPVHWPGS 360 PWRLLQVTWD EPDLLQNVKR VSPWLVELVS SMPAIHLSPF SPPRKKLRLP PHPDFPLEGQ 420 FTLPSFSTNP LGSSSPLCCI SDNTSAGIQG ARHTQFGTSL SDLHFNKLQS GLHPSFFQSL 480 DHAPPLTRTQ NGLTMNKADS SEDVSWLTIG NSSPSSKKAC EAITPQFVLF GQPILTEQQM 540 SLSFSSETVS QVVNGNSSSP EKTLSSVSFS PMVNQCPRQE NPSSEGFPFL KDRQMIDMGL 600 ETGQCKVFME SEDVGRTLDL SVLNSYEELY RKLADMFLIE PPETLNHVVY LNMTGAVKHA 660 GDEPFSEFKN SAKRLTVLAD AGSDNQGKRK WMTGARNAES GIDTSNKAGQ LSIFA

Sequence ? help Back to Top

Protein Sequence Length: 715 aa Download sequence

MQEMEKNLDS QLDSQLWHAC AGGMVQMPNV NSKVFYFPQG QAEHAHGNVD FGLSPSRVPP  60
LILCRVAAVK YMADPESDEV YSKIKLVPVR NNEPDYEDDG VANNGIGNGS EVQEKPASFA  120
KTLTQSDANN GGGFSVPRYC AETIFPRLDY SADPPVQTVL AKDVHGEIWK FRHIYRGTPR  180
RHLLTTGWST FVNHKKLIAG DSIVFLRTEN GDLCVGIRRA KRGIGGGQES LSGWNPAAGN  240
CASPYAGFSV FLREDDKRNG NGGNLKSGPR GKERVRPESV IEAATLAANG QPFEIVYYPR  300
ASTPEFCVKA SLVSTAMRVP WCGGMRFKMA FETEDSSRIS WFMGTISSAQ VVDPVHWPGS  360
PWRLLQVTWD EPDLLQNVKR VSPWLVELVS SMPAIHLSPF SPPRKKLRLP PHPDFPLEGQ  420
FTLPSFSTNP LGSSSPLCCI SDNTSAGIQG ARHTQFGTSL SDLHFNKLQS GLHPSFFQSL  480
DHAPPLTRTQ NGLTMNKADS SEDVSWLTIG NSSPSSKKAC EAITPQFVLF GQPILTEQQM  540
SLSFSSETVS QVVNGNSSSP EKTLSSVSFS PMVNQCPRQE NPSSEGFPFL KDRQMIDMGL  600
ETGQCKVFME SEDVGRTLDL SVLNSYEELY RKLADMFLIE PPETLNHVVY LNMTGAVKHA  660
GDEPFSEFKN SAKRLTVLAD AGSDNQGKRK WMTGARNAES GIDTSNKAGQ LSIFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein